Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2109 ATGGAAGCTCAACAAATCCTCTCTAGGTTTTGCCCCAAACCCTCGTCACTCCTGCTACCCTCTCATAAAAAGCTTCATACTTTACCTTGTGTTGGGCCCAAGAACCTTGGGATTCAGAGATTGGGGTGCAGTTACACTGAGGGAAAGAAGAAGAGGGTCTTTTGTGTAAGGAGGACGATAGAAGAAGAAGAAGTGAAGGAGGTGAAAGTTGGGGCCACTATGCCGGTGAGGAGGAAGAAGCTGGCAGTGTTCGTGTCCGGTGGAGGGTCCAATTTCAAGTCCATACATGAGGCTTCGTTGAAGGGTTCACTCCATGGTGATGTTCTTGTTTTGGTCACAAATAAACATGATTGTGGAGGTGCTGAGTATGCAAGAAATAATGGTATCTCAGTTGTTTTGTTCCCTAAAGTAAAGGATGGATCCGATGGGCTATCTCCAAGTGAGCTTGTTGACACACTAAGGAGTTTCCAAGTTGATTTTATTCTTTTAGCTGGATTCCTCAAACTTATACCTGTTGAATTGATTCGGGCTTATGAAAAGTCCATATTAAACATTCATCCATCACTTCTTCCAGCTTTTGGAGGCAAAGGATACTATGGTCTGAAGGTGCACAAAGCAGTTATTGCTTCGGGTGTAAGATATTCAGGTCCTACAATTCATTTCGTTGACGAACATTATGACACGGGGCGTATCCTTGCTCAACGTGCTGTCCCTGTACTGGCTAATGACACTGCAGAGGAGTTGGCTTCCAGGGTTCTCAAGGAGGAACACCGGTTATATGTGGAGGTGGTCAAAGCTTTGTGCGAAGAGCGTATAGTTTGGAGGGAAGACGGTGTCCCTCTCATTCGAAGCAAAGATAACCCCAATGAGTTCTGCTAA 879 0.4516 MEAQQILSRFCPKPSSLLLPSHKKLHTLPCVGPKNLGIQRLGCSYTEGKKKRVFCVRRTIEEEEVKEVKVGATMPVRRKKLAVFVSGGGSNFKSIHEASLKGSLHGDVLVLVTNKHDCGGAEYARNNGISVVLFPKVKDGSDGLSPSELVDTLRSFQVDFILLAGFLKLIPVELIRAYEKSILNIHPSLLPAFGGKGYYGLKVHKAVIASGVRYSGPTIHFVDEHYDTGRILAQRAVPVLANDTAEELASRVLKEEHRLYVEVVKALCEERIVWREDGVPLIRSKDNPNEFC* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2109 292 Gene3D - 61 290 - -
Ahy16g2109 292 Hamap Phosphoribosylglycinamide formyltransferase [purN]. 80 270 IPR004607 GO:0004644|GO:0006189
Ahy16g2109 292 SUPERFAMILY Formyltransferase 79 280 IPR036477 GO:0009058
Ahy16g2109 292 ProSitePatterns Phosphoribosylglycinamide formyltransferase active site. 216 239 IPR001555 -
Ahy16g2109 292 CDD FMT_core_GART 80 267 IPR004607 GO:0004644|GO:0006189
Ahy16g2109 292 Pfam Formyl transferase 79 264 IPR002376 GO:0009058
Ahy16g2109 292 PANTHER PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE 59 284 - -
Ahy16g2109 292 TIGRFAM PurN: phosphoribosylglycinamide formyltransferase 79 272 IPR004607 GO:0004644|GO:0006189
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2109 Ahy-Chr16 117233658 117238182 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2109 K00601 - gmx:548052 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2109 16 117233658 117238182 Ahy6g1818 6 88625746 88630258 hybridization