Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1817 ATGGTTGGGGCCGCCCCACGGTTCCTCTCTCTCCTCACCACAGCTCCCTCCCCTCTCCTCCGCCACCGCCGCCACCTCCTCCTCCTCTCCGCAAACTTCCGCCGCCTCTCCACTCCCTTTTCAACTTTTGCACCCTCTCCTCTGAAACTCAAACCCTCCCAGCACCATCACCATCCACAACCACAACAGCAGCACCAGCAGCAGCAACGCTTTCAAACCGTAGCAGCTTTCTCTCCTTCTTCCGACACCTTTCCTTCCTCAGTTTCACACCCATGGCCCGAGTGGTCCCGCTTCCTCTCCCACCTCACCTCCGCCGGGTACCTCCACCGCCCGCCCCCTGACCTCGGAACATTCGCGCCGCCCCCTGAGTTGTCGCGCCAATTCGTTGCCGAGGCTGCCGCTTGCTACGCCTTCGCCGCCGATAGACCCAACCTCTTGCGGTTGCTTTCGAAGAGAGACATCGGGGTTGTGGCTGAAAATGGTGTCCCCTTTCTGTTCCGAGATGCAAAGGAATCCATCGCAAAGATGAAAGCTTTCGTGTCAACCAATGATGCCGCCGTATTGGACACTGACAGAGCAACAACAGTTGATCTAATGAAGTTTATGCTTAGTTATGCAAGTAACCCATTGGTTACATCTGAAAGCAATAATCTATCTAACAGAGATATTGTTGAATCATCAGTGAGAAATCTGTTTGGTGAACTTTACAAGCTGAGTTACAGTGCACCTGGGCCCAACTCTTCTGATTCGATGCAAAATCAAATATCTAGTGGATATGGACAGACAATGCCTCCTGGTCGAAACATTGAAATGAAAAGGGGTGATTGGATTTGCCCAAGGTGTAATTTCATGAATTTCGCAAGAAATGTTAAATGCCGCGAGTGTGAGGAAGCAAGGCCAAAAAGACAATTGACAGGAGGAGAATGGGAATGTCCTCAGTGCGATTTCTATAATTATGGGAGGAATATGACTTGCTTAAGGTGTGATTGCAAGCGACCGGGACAGATATCTTTGGGTCCTGCCAATACCCTGTCAAATATGGGGTATGGAAATGGAGACAATACTAATACTTCAGAGATTGATAGCAGACTAGCTGCTAATGAAGAGAAAGCACGGCGTTGGTTTAGTAAGGTTTCTCAACTAGATAGCAGTGCGGATATTAACAGCTTGATTGGGGATGAAGATTTTCCCGAGATAATGCCATTAAGGAAAGGAGTAAATAGATTTGTTGTGAGCACAAGGAAAACTCCGTTGGAGAGGAGATTGGCTGACGCTCGATACAGGAGAAACTTGGACAATAATGGCATTCCCGGGGTTGAGGATTTTAAATCTGTGGAATCAACCAGGATAAATGATCCTCGATTGTCTTCAGATCTGGCTGCCCAAAAAATTGAGAACATGACAACAGAAAAGAGCGAAACTGATGCTCAGTATGCAGGTACTAGTACAGATTCATCAAGCAGGGTATCTGATGAGAACTTCCCTGAAGTAATGCCCATGCGCACAGGAGAAAACCGATTTGTTGTTAGCAAGAAAAAGGATCGATCTTTGACTTCACCTGCATACAAGAGACAATTGGCCATGGAACAATCTGGCAACAATACCAACTTTGTCCCCTTTGTTCCCTTCCCTCCAGATTACTTTGCCAAAAAGGACAAGCAACCGGAAAATGGAGTAGATTCAGTAGATATTTCTTCGAATGCTGAATCATCTTCAATATCTGAAGCGGCAGAGAATCCTCCAAAGATGCCAGATGATGCTAGAGCTAGAGCTGAGTTACGAGGTGCAAACTATTCCCCAGGTTTGACCAATGCTGAAACAATGTCTGGGGTTCCAGAGATGTTAGATAATGCTACACTTGGCCGGGAAAGAAAAGAAAATGTCAGAGAGATTAGAAGACAAGATGAAAACATGAAGAACAGTAGTCTGGAACCTTCTGGACAGCACTCGACTAAAAATGATATTGGTTCCATTTCTGGGGCATTAACTAGTGGAAATTCCAGTTTCAATCAAGAGAATTTCGGGAACAAGAACAGCAATCAAGAGCCAAATTTGACAGGCAGTTTGGAAAACCAGAATAACAGAACACAGTGGACAGGAAAGAGTTTGGAGGGGTCAGCTGTCAAGGAACCAGATCCTTTGGACATGTCAGAGGAGGCAAAGGCAGAGAGGTGGTTCCGTCGTGTTGCACAGATCAAGGATATCTCTGAGCTCAGTCAGATTCCAGATGAAGATTTTCCTTCGATAATGCCTATGCGTAAAGGCGTGAATAGATTCGTTGTGAGCAAGAGGAAAACGCCGTTGGAAAGGAGGTTGACATCTCAGCAGTACCGAAGAAACCTTCCTGTTGTGAGTTCAGATCCTCTTAAAAAGGAAAATGAAGGTAGCTGA 2391 0.4647 MVGAAPRFLSLLTTAPSPLLRHRRHLLLLSANFRRLSTPFSTFAPSPLKLKPSQHHHHPQPQQQHQQQQRFQTVAAFSPSSDTFPSSVSHPWPEWSRFLSHLTSAGYLHRPPPDLGTFAPPPELSRQFVAEAAACYAFAADRPNLLRLLSKRDIGVVAENGVPFLFRDAKESIAKMKAFVSTNDAAVLDTDRATTVDLMKFMLSYASNPLVTSESNNLSNRDIVESSVRNLFGELYKLSYSAPGPNSSDSMQNQISSGYGQTMPPGRNIEMKRGDWICPRCNFMNFARNVKCRECEEARPKRQLTGGEWECPQCDFYNYGRNMTCLRCDCKRPGQISLGPANTLSNMGYGNGDNTNTSEIDSRLAANEEKARRWFSKVSQLDSSADINSLIGDEDFPEIMPLRKGVNRFVVSTRKTPLERRLADARYRRNLDNNGIPGVEDFKSVESTRINDPRLSSDLAAQKIENMTTEKSETDAQYAGTSTDSSSRVSDENFPEVMPMRTGENRFVVSKKKDRSLTSPAYKRQLAMEQSGNNTNFVPFVPFPPDYFAKKDKQPENGVDSVDISSNAESSSISEAAENPPKMPDDARARAELRGANYSPGLTNAETMSGVPEMLDNATLGRERKENVREIRRQDENMKNSSLEPSGQHSTKNDIGSISGALTSGNSSFNQENFGNKNSNQEPNLTGSLENQNNRTQWTGKSLEGSAVKEPDPLDMSEEAKAERWFRRVAQIKDISELSQIPDEDFPSIMPMRKGVNRFVVSKRKTPLERRLTSQQYRRNLPVVSSDPLKKENEGS* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1817 796 MobiDBLite consensus disorder prediction 598 719 - -
Ahy6g1817 796 MobiDBLite consensus disorder prediction 777 796 - -
Ahy6g1817 796 ProSitePatterns Zinc finger RanBP2-type signature. 309 328 IPR001876 -
Ahy6g1817 796 Gene3D - 303 335 - -
Ahy6g1817 796 Gene3D - 265 302 - -
Ahy6g1817 796 Pfam Zn-finger in Ran binding protein and others 273 299 IPR001876 -
Ahy6g1817 796 Pfam Zn-finger in Ran binding protein and others 307 333 IPR001876 -
Ahy6g1817 796 SMART zf_4 274 298 IPR001876 -
Ahy6g1817 796 SMART zf_4 307 331 IPR001876 -
Ahy6g1817 796 MobiDBLite consensus disorder prediction 559 577 - -
Ahy6g1817 796 MobiDBLite consensus disorder prediction 640 703 - -
Ahy6g1817 796 MobiDBLite consensus disorder prediction 548 586 - -
Ahy6g1817 796 MobiDBLite consensus disorder prediction 47 71 - -
Ahy6g1817 796 PANTHER ZINC FINGER PROTEIN 452 795 - -
Ahy6g1817 796 PANTHER ZINC FINGER PROTEIN 3 414 - -
Ahy6g1817 796 SUPERFAMILY Ran binding protein zinc finger-like 266 301 IPR036443 -
Ahy6g1817 796 MobiDBLite consensus disorder prediction 467 492 - -
Ahy6g1817 796 ProSitePatterns Zinc finger RanBP2-type signature. 276 295 IPR001876 -
Ahy6g1817 796 PANTHER ZINC FINGER PROTEIN VAR3, CHLOROPLASTIC 452 795 - -
Ahy6g1817 796 PANTHER ZINC FINGER PROTEIN VAR3, CHLOROPLASTIC 3 414 - -
Ahy6g1817 796 PANTHER ZINC FINGER PROTEIN 409 432 - -
Ahy6g1817 796 PANTHER ZINC FINGER PROTEIN VAR3, CHLOROPLASTIC 409 432 - -
Ahy6g1817 796 MobiDBLite consensus disorder prediction 618 639 - -
Ahy6g1817 796 MobiDBLite consensus disorder prediction 467 493 - -
Ahy6g1817 796 ProSiteProfiles Zinc finger RanBP2 type profile. 272 301 IPR001876 -
Ahy6g1817 796 ProSiteProfiles Zinc finger RanBP2 type profile. 305 334 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1817 Ahy-Chr6 88555015 88559218 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1817 90 338 EF-hand Containing Proteins AT1G55040 33.333 3.80e-42 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1817 - - aip:107604755 1347.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2107 16 117168944 117172747 Ahy6g1817 6 88555015 88559218 hybridization