Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1807 ATGGAATCGAGCATTCTAGAATCCATAGGCGTGGAGATAATCGGAGTCATGTCACCAGTCTCCATCTGCATGTTTCTCGTCGTCCTCCTCGTCTACTCCCTCTCCTCCTCCTCCTCCCCTTCCTCAGCCGTCTCCGACATCCGCACCGCCGCTAACCTCGTCTACGCCGAGAACCCCTCCGACACCGCCGCACAGAAGCTCGAGGGAGCACTCCTCAACGCCCTTGTATTCGTCATCCTTATCGCCATCGTCACCTTCCTCCTCCTTCTCCTGTACTACTACAACTGCACCTCCTTCCTCAAACACTACACGCGCTTCAGCGCCTTCTTCGTCCTCGGCTCCATGGGCGGATCCATCTTCCTCTCACTCATCCAGCGATTCTCGATCCCCGTCGATTCCGTCACGTGCTTTATCCTTCTCTTCAATTTTACCGTCGTCGGGGTCCTCTCCGTTTTCGGCACCGGGATTCCGATAATCGTTCGGCAGTCGTACATGGTCTGTTTGGGGATCAGTGTTGCTGCGTGGCTGACCAAGCTGCCCGAGTGGACCACCTGGGTTCTTCTGGTGGCTCTGGCGGTTTATGATCTTGTGGCGGTTTTGGCACCTGGTGGACCGTTGAAGATGTTGGTTGAGTTGGCATCCAGCCGGAATGAGGAGCTTCCTGCTTTGATTTATGAAGCCCGGCCCACCACAGTGGCGCGGGCTGGGTCTCGCGGAGGGACTAGTTTGGGGCTTTTGGTGACTGGGGTTACAGCAGGCGAGCCGTCTTCAGCACCGTCATCGTCGTCGTCATCGGCAATTGAGCTTCAAGCTGTGTCTAGGGACAACAAAGATAGGAATGTGAATGATAATTTGAATGAGAATAGGGATTATGGTGGGAATGAGTACTCTGTTGTGGCAATGGGTGGTTTTGGGGGTGAGAGGAGTCAGGGTGGGAGGAATGATGAAGAGGAGAGATCGCCATTGGTTGGCAATGGTGGCGGAGAGGGTGGGATTGTTGATGAGGAAAGGCATGAAGGGAATGAGAGCAGAGGTGGTGATGTGGAGATTGCTGAGAGGGGCATTAAGCTTGGCCTTGGAGACTTTGTTTTCTACAGTGTTCTTGTTGGTAGAGCTGCAATGTATGATCTCATGACTGTGTATGCTTGTTACCTTGCAATTATATCAGGACTAGGCTGCACTCTTATTCTGCTGTCGGTGTGCCGCCAAGCTCTGCCGGCGCTCCCAATTTCGATCACCTTGGGTGTTCTTTTCTATTTCTTGACTAGATTGCTGATGGAACCCTTCATTGTTGGGACTGCCACAAATTTGATGATGTTTTAA 1323 0.5276 MESSILESIGVEIIGVMSPVSICMFLVVLLVYSLSSSSSPSSAVSDIRTAANLVYAENPSDTAAQKLEGALLNALVFVILIAIVTFLLLLLYYYNCTSFLKHYTRFSAFFVLGSMGGSIFLSLIQRFSIPVDSVTCFILLFNFTVVGVLSVFGTGIPIIVRQSYMVCLGISVAAWLTKLPEWTTWVLLVALAVYDLVAVLAPGGPLKMLVELASSRNEELPALIYEARPTTVARAGSRGGTSLGLLVTGVTAGEPSSAPSSSSSSAIELQAVSRDNKDRNVNDNLNENRDYGGNEYSVVAMGGFGGERSQGGRNDEEERSPLVGNGGGEGGIVDEERHEGNESRGGDVEIAERGIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCRQALPALPISITLGVLFYFLTRLLMEPFIVGTATNLMMF* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1807 440 MobiDBLite consensus disorder prediction 304 345 - -
Ahy6g1807 440 MobiDBLite consensus disorder prediction 252 288 - -
Ahy6g1807 440 Gene3D Presenilin 333 431 IPR042524 -
Ahy6g1807 440 PANTHER PRESENILIN 1 440 IPR001108 GO:0004190|GO:0016021|GO:0016485
Ahy6g1807 440 SMART psh_8 68 426 IPR006639 GO:0004190|GO:0016021
Ahy6g1807 440 MobiDBLite consensus disorder prediction 253 271 - -
Ahy6g1807 440 MobiDBLite consensus disorder prediction 331 345 - -
Ahy6g1807 440 Pfam Presenilin 10 430 IPR001108 GO:0004190|GO:0016021|GO:0016485
Ahy6g1807 440 PRINTS Presenilin family signature 17 27 IPR001108 GO:0004190|GO:0016021|GO:0016485
Ahy6g1807 440 PRINTS Presenilin family signature 178 185 IPR001108 GO:0004190|GO:0016021|GO:0016485
Ahy6g1807 440 PRINTS Presenilin family signature 195 212 IPR001108 GO:0004190|GO:0016021|GO:0016485
Ahy6g1807 440 PANTHER PRESENILIN 1 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1807 Ahy-Chr6 88065666 88067664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1807 1 440 Miscellaneous Gene Families AT1G08700 62.069 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1807 K04505 - gmx:100819461 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2097 16 116807304 116809272 Ahy6g1807 6 88065666 88067664 hybridization