Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2097 ATGGAATCGAGCATTCTAGAATCCATCGGCGTGGAGATAATCGGAGTCATGTCACCAGTCTCCATCTGCATGTTTCTCGTCGTCCTCCTCGTCTACTCCCTCTCCTCCTCCTCCTCCTCCCCTTCCTCAGCCGTCTCCGACATCCGCACCGCCGCTAACCTCGTCTACGCCGAGAACCCCTCCGACACCGCCGCACAGAAGCTCGAGGGAGCACTCCTCAACGCCCTCGTATTCGTCATCCTTATCGCCATCGTCACCTTCCTCCTCCTCCTCCTGTACTACTACAACTGCACCTCCTTCCTCAAACACTACACGCGCTTCAGCGCCTTCTTCGTCCTCGGCTCCATGGGCGGATCCATCTTCCTCTCACTCATCCAGCGATTCTCGATCCCCGTCGATTCCGTCACGTGCTTTATCCTTCTCTTCAATTTCACCGTCGTCGGGGTTCTCTCCGTTTTTGGCACCGGGATTCCGATAATCGTTCGGCAGTCGTACATGGTCTGTTTGGGTATCAGTGTTGCTGCGTGGCTGACCAAGCTGCCCGAGTGGACCACCTGGGTTCTTCTGGTGGCTCTGGCGGCTTATGATCTTGTGGCGGTTTTGGCACCTGGTGGACCGTTGAAGATGTTGGTTGAGTTAGCATCCAGCCGGAATGAGGAGCTTCCTGCTTTGATTTATGAGGCCCGGCCCACCACAGTGGCACGGGCCGGGTCTCGCGGAGGGACCAGTTTGGGGCTTTTGGTGACTGGGGTTACAGCAGGGGAGCCGTCTTCAGCGCCGTCATCATCGTCGTCATCGGCAATTGAGCTTCAAGCGGTGTCTAGGGACAACAAAGATAGGAATGTGAATGATAATTTGAATGAGAATAGGGATTATGGTGGGAATGAGTACTCTGTTGTGGCAATGGGTGGTTTTGGGGGTGAGAGAAGTCAGGGTGGGAGGAATGATGAAGAGGAGAGATCGCCATTGGTTGGCAATGGTGGCGGAGAGGGTGGTATTGTTGATGAGGAAAGGCATGAAGGGAATGAGAGCAGAGGTGGTGATGTGGAGATTGCTGAGAGGGGCATTAAGCTTGGCCTTGGAGACTTTGTTTTCTACAGTGTTCTTGTTGGTAGAGCTGCAATGTATGATCTCATGACTGTGTATGCTTGTTACCTTGCAATTATATCAGGACTAGGCTGCACTCTTATTCTGCTGTCGGTGTGCCGCCAAGCTCTGCCGGCGCTCCCAATTTCGATCACCTTGGGTGTTCTTTTCTATTTCTTGACCAGATTGCTGATGGAACCCTTCATTGTTGGGACTGCCACAAATTTGATGATGTTTTAA 1326 0.5302 MESSILESIGVEIIGVMSPVSICMFLVVLLVYSLSSSSSSPSSAVSDIRTAANLVYAENPSDTAAQKLEGALLNALVFVILIAIVTFLLLLLYYYNCTSFLKHYTRFSAFFVLGSMGGSIFLSLIQRFSIPVDSVTCFILLFNFTVVGVLSVFGTGIPIIVRQSYMVCLGISVAAWLTKLPEWTTWVLLVALAAYDLVAVLAPGGPLKMLVELASSRNEELPALIYEARPTTVARAGSRGGTSLGLLVTGVTAGEPSSAPSSSSSSAIELQAVSRDNKDRNVNDNLNENRDYGGNEYSVVAMGGFGGERSQGGRNDEEERSPLVGNGGGEGGIVDEERHEGNESRGGDVEIAERGIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCRQALPALPISITLGVLFYFLTRLLMEPFIVGTATNLMMF* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2097 441 PANTHER PRESENILIN 1 441 - -
Ahy16g2097 441 MobiDBLite consensus disorder prediction 254 272 - -
Ahy16g2097 441 MobiDBLite consensus disorder prediction 332 346 - -
Ahy16g2097 441 SMART psh_8 69 427 IPR006639 GO:0004190|GO:0016021
Ahy16g2097 441 PRINTS Presenilin family signature 17 27 IPR001108 GO:0004190|GO:0016021|GO:0016485
Ahy16g2097 441 PRINTS Presenilin family signature 196 213 IPR001108 GO:0004190|GO:0016021|GO:0016485
Ahy16g2097 441 PRINTS Presenilin family signature 179 186 IPR001108 GO:0004190|GO:0016021|GO:0016485
Ahy16g2097 441 PANTHER PRESENILIN 1 441 IPR001108 GO:0004190|GO:0016021|GO:0016485
Ahy16g2097 441 Pfam Presenilin 10 431 IPR001108 GO:0004190|GO:0016021|GO:0016485
Ahy16g2097 441 Gene3D Presenilin 334 432 IPR042524 -
Ahy16g2097 441 MobiDBLite consensus disorder prediction 305 346 - -
Ahy16g2097 441 MobiDBLite consensus disorder prediction 253 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2097 Ahy-Chr16 116807304 116809272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2097 1 441 Miscellaneous Gene Families AT1G08700 61.720 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2097 K04505 - gmx:100819461 494.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2097 16 116807304 116809272 Ahy6g1807 6 88065666 88067664 hybridization