Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1790 ATGAAAATGGAGGGTGATCTGAAGCAGAAGCTGCTGCTGCCTTCTTCAGGAGGAGTAGAAGAGGAAGAGGGCTTGTCACTGGTTAGGAGGGTGTGGGAAGAGAGCAAGAAGATGTGGATAGTGGCGGCGCCAGCCATATTCACAAGAGCTTCCACGTTTGGAATCCAAGTTATAAGCCAAGCGTTTGTTGGACATCTTGGTTCTAAGGAACTCGCTGCTTTCGCTCTTGTTTACACCGTTCTTATCAGGTTCGCTAACGGGATTCTGTTAGGAATGGCGAGTGCTTTGTCAACACTGTGTGGTCAAGCATACGGTGCAAAGGAATATGGCATGATGGGAGTTTACCTTCAAAGATCATGGATTGTTTTGTTCCTGACTTCACTGATTCTTCTTCCGGTGTTCATCTTCACCACCCCAATTTTAAGCCTCTTGGGCCAAGACGAAACAATAGCACAAGTGTCAGGAACCATTTCACTTTGGTCAATTCCTATCATGTTTGCCTTTATCGTATCCTTCACTACCCAGACATTCCTGCAGTCGCAAAGCAAGAACGTCATTATCGCCTTCTTGGCAGCTTTCTCGATAATCCTTCACATCTTCCTTTCTTGGCTTACCACTATGAAGTACAAATTGGGTCTTCCTGGTGCAATGACCTCCACTAGTTTGGCGTATTGGATTCCCAACTTTGGTCAACTGATATTCATTTTCGGTTGGTGCAAGCAAACATGGCATGGGTTCTCATTCTTGGCATTCAAAGACCTTTGGCCTGTTGTTAAGCTTTCGCTTTCATCCGGTGCCATGTTGTGTCTTGAGCTATGGTACAACACAATATTGGTTCTTTTGACAGGTAACCTGAGAAATGCAGAGGTGGAAATCGATGCTCTGTCTATATGTCTTAACATCAATGGATGGGAAATGATGATATCACTTGGGTTCATGGCTGCTGCTAGCGTACGAGTGGCGAATGAGCTTGGAAGAGGAAGTGCCAAGGCTGCCAAGTTCTCGATCCTAGTGACTGTGCTAACATCATTGGCCATTGGGTTCTTTCTGTTTGTATTCTTCTTGTTGTTTAGGGAACGACTTGCTTACATATTTACCACAGATGAGAATGTTGCCCGGGCAGTCGGTAATTTGTCACCATTGTTATCAGTCTCTATATTACTAAACAGCGTTCAGCCCGTACTCTCAGGTGTTGCGATTGGAGCCGGTTGGCAAAGCATTGTTGCTTATGTTAACATAGGTTGCTATTACCTCATTGGAATTCCTGTCGGTATTGTGCTTGGTCATGTTCTTGATTTGCAAGTCGAGGGAATTTGGGTTGGAATGTTGTTTGGAACTTTTATTCAAACCGTAGTGCTTGTTATAATCACCTACAAAACTAACTGGGATGAGCAGGTGGTCATAGCTCGTTCAAGAATTAGCAAGTGGGCTAAAATGGATGGCCTCGATCATGAATCAAAACCGGATTCATCAGAAAGTTAA 1482 0.4433 MKMEGDLKQKLLLPSSGGVEEEEGLSLVRRVWEESKKMWIVAAPAIFTRASTFGIQVISQAFVGHLGSKELAAFALVYTVLIRFANGILLGMASALSTLCGQAYGAKEYGMMGVYLQRSWIVLFLTSLILLPVFIFTTPILSLLGQDETIAQVSGTISLWSIPIMFAFIVSFTTQTFLQSQSKNVIIAFLAAFSIILHIFLSWLTTMKYKLGLPGAMTSTSLAYWIPNFGQLIFIFGWCKQTWHGFSFLAFKDLWPVVKLSLSSGAMLCLELWYNTILVLLTGNLRNAEVEIDALSICLNINGWEMMISLGFMAAASVRVANELGRGSAKAAKFSILVTVLTSLAIGFFLFVFFLLFRERLAYIFTTDENVARAVGNLSPLLSVSILLNSVQPVLSGVAIGAGWQSIVAYVNIGCYYLIGIPVGIVLGHVLDLQVEGIWVGMLFGTFIQTVVLVIITYKTNWDEQVVIARSRISKWAKMDGLDHESKPDSSES* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1790 493 TIGRFAM matE: MATE efflux family protein 44 439 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy6g1790 493 Pfam MatE 44 204 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy6g1790 493 Pfam MatE 266 425 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy6g1790 493 PANTHER MULTIDRUG RESISTANCE PROTEIN 16 476 - -
Ahy6g1790 493 PANTHER PROTEIN DETOXIFICATION 16 476 - -
Ahy6g1790 493 CDD MATE_eukaryotic 34 466 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1790 Ahy-Chr6 87380040 87383581 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1790 K03327 - gmx:100792122 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2085 16 116314842 116326862 Ahy6g1790 6 87380040 87383581 hybridization