Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2085 ATGGGGAAGGAGGAAATAAACGAGAAGCTTTTGCAAAAGAATTCATCAATTGGGAAAAGGGTATGGAAAGAGAGCAAGAAGATGTGGGTAGTGGCCGGGCCAGCCATAATGTCAAGGTTCTCAACATTTGGTATAACTGTGGTTAGTCAATCCTTCATTGGTCATATTGGATCCACTGACCTTGCTGCCTATGCACTTGTCATGACTTTACTAGTCAAATTTGCAAATGGTGTTTTGCTAGGTATGGCAAGTGCATTGGAAACTCTATGTGGGCAAGCATATGGAGCCAAAAGATATGAGATGCTTGGAATATATCTCCAAAGATCATGGATAATCTTGTTCATGACCTCACTACTCCTTCTTCCAATTTTCATCTTCACAGCACCACTCTTAAAGTTTCTAGGCCAAGAAAAAACCATTGCTGAAGTGGCAGGAAGCATTTCACTATGGTCAATTCTTGTGGTATTTTCATTCTTAGTTTCATTCACATGCCAAATGTTCCTCCAAGCACAGAGCAAGAACAAGATCATTGCATACCTTGCAGCACTTTCAATCTCAACTCATATTTTTCTATCATGGCTTTTGACTGTGAGGTATAAGCTTGGGCTTAATGGTGCAATGATTTCAACAGTTTTGGCATATTGGATACCTAATTTGGGCCAGCTTGTTTACATCATGAGGAATTGTCCTCAAACTTGGAAAGGTTTCTCATTTTTAGCATTTAAGGATCTTTGGCCTCTTGCCAAGCTCTCTTTGTCTTCTGGGGCTATGATGTGCCTTGAGATATGGTACAATGCAGTCTTGATCCTTCTAACAGGGAACATGAAAAATGCTGAGGTTTACATTGATGCACTATCCATATGCCTCAACATCAATGGATGGGAAATGATGATAGCCCTTGGTTTCTTTGCTGCAGCTGGTGTGAGGGTGGCAAATGAACTTGGAAGAGGGAGTTCAGAGGGTGCAAAATTCTCCATTGTAGTGACAGCAGTGACATCATTTTGCATTGGCATTGTGCTATTCTTTGTATTCCTTTTGCTGAGAGAAAGAGTTGCATATGTTTTCACTCCAAATCCAATGGTGGCTGAAGCAGTTGGGGAATTATCACCTTTACTCGCTTTCTCTATCTTGTTGAACAGTCTCCAACCTGTGCTCTCCGGAGTTTCTGTTGGAGCTGGGTGGCAGAGTGTTGTAGCATACGTAAACATAGGTTGCTATTACCTAATTGGTATTCCTGTTGGAGTGGTACTTGGTAATTTTCTCCATTTGAAAATCAAGGGTATTTGGATCGGAATGCTGTTTGGAACATTTGTTCAAACGATAATGCTTATTACAATCACAATGAAAACAGATTGGGACAAGCAAGTAGAGATAGCTCGAAATCGTGTTAACAAATGGACTATAATCGAAGAGAACGAAGAACCCTGCAACAGTAGTTAG 1440 0.4076 MGKEEINEKLLQKNSSIGKRVWKESKKMWVVAGPAIMSRFSTFGITVVSQSFIGHIGSTDLAAYALVMTLLVKFANGVLLGMASALETLCGQAYGAKRYEMLGIYLQRSWIILFMTSLLLLPIFIFTAPLLKFLGQEKTIAEVAGSISLWSILVVFSFLVSFTCQMFLQAQSKNKIIAYLAALSISTHIFLSWLLTVRYKLGLNGAMISTVLAYWIPNLGQLVYIMRNCPQTWKGFSFLAFKDLWPLAKLSLSSGAMMCLEIWYNAVLILLTGNMKNAEVYIDALSICLNINGWEMMIALGFFAAAGVRVANELGRGSSEGAKFSIVVTAVTSFCIGIVLFFVFLLLRERVAYVFTPNPMVAEAVGELSPLLAFSILLNSLQPVLSGVSVGAGWQSVVAYVNIGCYYLIGIPVGVVLGNFLHLKIKGIWIGMLFGTFVQTIMLITITMKTDWDKQVEIARNRVNKWTIIEENEEPCNSS* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2085 479 Pfam MatE 34 194 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy16g2085 479 Pfam MatE 256 415 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy16g2085 479 PANTHER PROTEIN DETOXIFICATION 12 467 - -
Ahy16g2085 479 CDD MATE_eukaryotic 24 457 IPR045069 GO:0042910|GO:1990961
Ahy16g2085 479 TIGRFAM matE: MATE efflux family protein 34 429 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy16g2085 479 PANTHER MULTIDRUG RESISTANCE PROTEIN 12 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2085 Ahy-Chr16 116314842 116326862 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2085 K03327 - gmx:100775619 752.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2085 16 116314842 116326862 Ahy16g2085 16 116314842 116326862 ECH
Ahy16g2085 16 116314842 116326862 Ahy6g1790 6 87380040 87383581 hybridization