Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1704 ATGGGAGAGATGTTGGAGCTGAGCCCGGACGAAGAGAGAATAATGATCAGAGACATTGCCCTCTCTTCTCAATCTAATAGCAAAGAAGGCGACACCTTCTTCTTAATCACTCAGAGATGGTGGCAACATTGGATTGAATATGTGAACCAAGATCAGTCAAACAATTCTTATGATGGTTCCTCCTTTTTAGAATATGGTGACTTGCCAAATTCAAATGCTTTAAAGAGGCCTGCTGTTATTGATAATTCTGATTTGATAGATGATTCTGTGTCAGAGGACTCTAGTACGGGTATTGATATTCATGATACACTTTTAGAAGGTCGTGACTATGTATTACTTCCCCAAGAAGTTTGGAACCAATTATATGCATGGTATGGTGGTGGACCTACATTGCCAAGGAAAGTTATCAGTGCAGGTCTTTCCCAGACAGAGCTGGCCGTAGAGGTGTATCCTCTACGGCTTCAATTACTCATGTTGCCAAGAAATGATCGTACCAGCATAAGAATAAGCAAGAAGGAAACCATTGGACAGCTTCACAGGAAAGCTTGTGAAATATTTGATCTTCCATTGGACCAAGTATGTATTTGGGATTACTATGCCCGCCGGAAGAATGCCTTGATGAATGACATGGACAAAACACTTGATGATGCCAATATACAAATGGACCAAGATATTCTTGTTGAGGTTATCAACAATACGAATGACACAAGCTCTGCCCATGAAAATGGGTCTGCGCAGAGGGAAGCAAATTCTGTTCTTGTCGAGCCTTCAAACTCAAATTTATCAATTGCTGGTGGCCTGTCTGCTAGCAGGGTTCCCTCTAGAAGCTATAATGCAGATCTTTCTTCTTCTCAGAACCTAAATCCTCCAGCCAGAGATGCGGAAAATCCTTATGGGAGTGGTGTCACCACACGAGGTTCAGTGAGTGGTCTCACCGGACTGCTGAATCTTGGCAACACTTGTTTCATGAATAGTGCAATACAGTGTCTTGTCCATACACCAGAGTTTGCTAGGTACTTTCGGGAGGACTATCACCAAGAGATAAATTGGCAAAATCCATTGGGCATGGTTGGTGAGCTAGCCCTAGCCTTTGGTGAGTTGCTTCGTAAACTATGGGCACCTGGGCGAACACCAATTGCTCCTCGGCCTTTTAAAGCCAAGCTTGCTCGCTTTGCACCTCAGTTCAGTGGGCACAATCAGCACGATTCTCAGGAGCTTTTAGCATTTCTGCTGGATGGTCTTCACGAAGACTTGAATCGTGTTAAACACAAACCATATATAAAGTCTCGAGATGCAGATGGCCGACCAGATGAAGAAGTGGCTGATGAGTATTGGGCAAATCATATTGCTCGCAATGATTCCATAATTGTTGATGTTTGCCAGGGGCAATACAAGTCAACATTGGTTTGTCCAGTTTGCAATAAAGTCTCTGTCACGTTTGATCCTTTTATGTACCTTTCCTTGCCACTCCAGTCAACCAGCAGCAGGACCATGACAGTGACAGTTTTTACTTGTGATGGAACTGCCCTGCCATCTCCTTGTACTGTAACTGTGCCTAAGCAGGGACGCTGCAAAGATCTGATTCAGGCTCTCAGCAATGCTTGCTCACTGAAGCATAACGAGAGACTGTTGCTTGTAGAGGTACGAAACCATTTGATTCATAGATTTCTTGAAGATCCTCTTCAGTTGTTGTCCACTATCAAAGATGATGACCATGTTGCTGTTTACAAGATTCCAAAGATAGAGAAAAACACAAAGTATCTGCAGTTGATCCACCGCCGGAGAGAGCATGACTCGCACACTGTATCAGGATGGAAGCCATATGGAACACCTATTGTGTCATTGATCTCATGTGATGATCCAGTTACAAGAGGCGATATACAAGTGATAGTTAATCGTATGCTCTCTCCACTGTTGAGGAAAAGTGGCAATACAGAGCACACTAATACAGAAACCAGCATCACAAAAGCTGCTGGCGACAATGCTTCTAGCGATGCATATGCTACCAACTTGGTGTCAAATTCAGTAAATAAGGCAGGACGAATGCCAACACTACCCCTTCTTTTGATAGATGAAAGCAATGCTTGCATTGATCTTTCTATGGGAGAGGATAAAGTTGTTAAACTTCCTTCTTCGTCAACACTTCTAGTGTATATTGATTGGTCTCAAAAGCTTCTGGAGAAGTATGATACTCATCCACTTGAGACTTTGCCTGAAGTTTTAAAATACGGGCCCGTGTCCAAGAAAGCTCGTACTGAACCCCTCTCATTGTACACCTGTTTGGAAGCTTTTCTGCGTGAAGAACCTCTGGTGCCTGAAGATATGTGGTACTGTCCCCAATGCAAAGAGAGAAGACAAGCAAGCAAAAAGCTTGACTTGTGGAGGCTCCCAGAGGTTTTGGTCATTCATTTGAAGAGGTTCTCATACAGCAGGTCAATGAAGCATAAACTAGAGACCTTTGTTAACTTCCCGGTTCATGACTTTGACTTAACGAACTATGTAGCCAATAAAAACAATTCTCGGCGTCAGCTGTATGAACTGTATGCCCTCACAAACCATTATGGTAGTATGGGTAGTGGTCATTACACTGCACATATCAAGGTTTTTCCCAATGTGCAGCTCTTAGATGAAAACAGGTGGTACAATTTTGACGACAGCCACATATCACCCATAAGTGAGGATGATGTGAACACTGCAGCTGCCTATGTTCTATTTTACCGGAGGGTGCGGAGTGACGATGATTCTGTTAGCAATGGGGCCTAG 2763 0.4339 MGEMLELSPDEERIMIRDIALSSQSNSKEGDTFFLITQRWWQHWIEYVNQDQSNNSYDGSSFLEYGDLPNSNALKRPAVIDNSDLIDDSVSEDSSTGIDIHDTLLEGRDYVLLPQEVWNQLYAWYGGGPTLPRKVISAGLSQTELAVEVYPLRLQLLMLPRNDRTSIRISKKETIGQLHRKACEIFDLPLDQVCIWDYYARRKNALMNDMDKTLDDANIQMDQDILVEVINNTNDTSSAHENGSAQREANSVLVEPSNSNLSIAGGLSASRVPSRSYNADLSSSQNLNPPARDAENPYGSGVTTRGSVSGLTGLLNLGNTCFMNSAIQCLVHTPEFARYFREDYHQEINWQNPLGMVGELALAFGELLRKLWAPGRTPIAPRPFKAKLARFAPQFSGHNQHDSQELLAFLLDGLHEDLNRVKHKPYIKSRDADGRPDEEVADEYWANHIARNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPLQSTSSRTMTVTVFTCDGTALPSPCTVTVPKQGRCKDLIQALSNACSLKHNERLLLVEVRNHLIHRFLEDPLQLLSTIKDDDHVAVYKIPKIEKNTKYLQLIHRRREHDSHTVSGWKPYGTPIVSLISCDDPVTRGDIQVIVNRMLSPLLRKSGNTEHTNTETSITKAAGDNASSDAYATNLVSNSVNKAGRMPTLPLLLIDESNACIDLSMGEDKVVKLPSSSTLLVYIDWSQKLLEKYDTHPLETLPEVLKYGPVSKKARTEPLSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPVHDFDLTNYVANKNNSRRQLYELYALTNHYGSMGSGHYTAHIKVFPNVQLLDENRWYNFDDSHISPISEDDVNTAAAYVLFYRRVRSDDDSVSNGA* 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1704 920 MobiDBLite consensus disorder prediction 275 302 - -
Ahy6g1704 920 CDD Peptidase_C19R 747 907 - -
Ahy6g1704 920 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 6 919 - -
Ahy6g1704 920 SUPERFAMILY DUSP-like 7 136 IPR035927 -
Ahy6g1704 920 Pfam DUSP domain 30 136 IPR006615 GO:0004843
Ahy6g1704 920 Gene3D - 3 149 IPR035927 -
Ahy6g1704 920 Pfam Ubiquitin carboxyl-terminal hydrolase 312 906 IPR001394 GO:0004843|GO:0016579
Ahy6g1704 920 SMART dusp 26 139 IPR006615 GO:0004843
Ahy6g1704 920 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 312 909 IPR028889 -
Ahy6g1704 920 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 5 6 919 - -
Ahy6g1704 920 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 845 862 IPR018200 GO:0004843|GO:0006511
Ahy6g1704 920 Gene3D Cysteine proteinases 301 540 - -
Ahy6g1704 920 MobiDBLite consensus disorder prediction 275 291 - -
Ahy6g1704 920 Gene3D - 150 238 - -
Ahy6g1704 920 Gene3D Cysteine proteinases 722 916 - -
Ahy6g1704 920 SUPERFAMILY Cysteine proteinases 310 909 IPR038765 -
Ahy6g1704 920 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 313 328 IPR018200 GO:0004843|GO:0006511
Ahy6g1704 920 ProSiteProfiles DUSP domain profile. 7 136 IPR006615 GO:0004843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1704 Ahy-Chr6 80628592 80637158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1704 756 911 Miscellaneous Gene Families AT4G31670 33.333 4.15e-17 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1704 - - gmx:100794067 1597.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1983 16 106621188 106629698 Ahy6g1704 6 80628592 80637158 hybridization