Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1983 ATGGGAGAGATGTTGGAGCTGAGCCCGGACGAAGAGAGAATAATGATCAGAGACATTGCCCTCTCTTCTCAATCTAATAGCAAAGAAGGCGACACCTTCTTCTTAATCACTCAGAGATGGTGGCAACATTGGATTGAATATGTGAACCAAGATCAGTCAAACAATTCTTATGATGGTTCCTCCTTTTTAGAATATGGTGACTTGCCAAATTCAAATGCTTTAAAGAGGCCTGCTGTTATTGATAATTCTGATTTGATAGATGATTCTGTGTCAGAGGACTCTAGTACGGGTATTGATATTCATGATACACTTTTAGAAGGTCGTGACTATGTATTACTTCCCCAAGAAGTTTGGAACCAATTATATGCATGGTATGGTGGTGGACCTACATTGCCAAGGAAAGTTATCAGTGCAGGTCTTTCCCAGACAGAGCTGGCCGTAGAGGTGTATCCTCTACGGCTTCAATTACTCATGTTGCCAAGAAATGATCGTACCAGCATAAGAATAAGCAAGAAGAGAAATTTTTGGCAGGAAACCATTGGACAGCTTCACAGGAAAGCTTGTGAAATATTTGATCTTCCATTGGACCAAGTATGTATTTGGGATTACTATTCCCGCCGGAAGAATGCCTTGATGAATGACATGGACAAAACACTTGATGATGCCAATATACAAATGGACCAAGATATTCTTGTTGAGGTTATCAACAATACGAATAACACAAGCTCTGCCCATGAAAATGGGTCTGCGCAGAGGGAAGCAAGTTCTGTTCTTGTCGAGCCTTCAAACTCAAATTTATCAATTGCTGGTGGCCTGTCTGCTAGCAGGGTTCCCTCTAGAAGCTATAATGCAGATCTTTCTTCTTCTCAGAACCTAAATCCTCCAGCCAGAGATGCGGAAAATCCTTATGGGAGTGGTGTCACCACACGAGGTTCAGTGAGCGGTCTCACCGGGCTGCTGAATCTTGGCAACACTTGTTTCATGAATAGTGCAATACAGTGTCTTGTCCATACACCAGAGTTTGCTAGGTACTTTCGGGAGGACTATCATCAAGAGATAAATTGGCAAAATCCATTGGGCATGGTTGGTGAGCTAGCCCTAGCCTTTGGTGAGTTGCTTCGTAAACTATGGGCACCTGGGCGAACACCAATTGCTCCTCGGCCTTTCAAAGCCAAGCTTGCTCGCTTTGCACCTCAGTTCAGTGGGCACAATCAGCACGATTCTCAGGAGCTTTTAGCATTTCTGCTGGATGGTCTTCACGAAGACTTGAATCGTGTTAAACACAAACCATATATAAAGTCTCGAGATGCTGATGGCCGACCAGATGAAGAAGTGGCTGATGAGTATTGGGCAAATCATATTGCTCGCAATGATTCCATAATTGTTGATGTTTGCCAGGGGCAATACAAGTCAACATTGGTTTGTCCAGTTTGCAATAAAGTCTCTGTCACGTTTGATCCTTTTATGTACCTTTCGTTGCCACTCCAGTCAACCAGCAGCAGGACCATGACAGTGACAGTTTTTACTTGTGATGGAACTGCCCTGCCATCTCCTTGTACTGTAACTGTGCCTAAGCAGGGACGCTGCAAAGATCTGATTCAGGCTCTCAGCACTGCTTGCTCATTGAAGCATAACGAGAGACTGTTGCTTGTAGAGGTACGAAACCATTTGATTCATAGATTTCTTGAAGATCCTCTTCAGTTGTTGTCCACTATCAAAGATGATGACCATGTTGCTGTTTACAAGATTCCAAAGATAGAGAAAAACACAAAGTATCTCCAGTTGATCCACCGCCGGAGAGAGCAGAGCAGTGACTCGCACACTGTATCAGGATGGAAGCCATATGGAACACCTATTGTGTCATTGATCTCATGTGATGATCCAGTTACAAGAGGCGATATACAAGTGATAGTTAATCGTATGCTCTCTCCACTGTTGAGGAAAAGTGGCAATACAGAGCACACTAATACAGAAACCAGCATCACAAAAGCTGCTGGCGACAATGCTTCTAGCGATGCATATGCTACCAACTTGGTGTCAAATTCAGTAAATAAGGCTGGACGAACACCAACACTACCCCTTCTTTTGATAGATGAAAGCAATGCTTGCATTGATCTTTCTATGGGAGAGGATAAAGTTGTTAAACTTCCTTCTTCGTCAACACTTCTAGTGTATATTGATTGGTCTCAAAAGCTTCTGGAGAAGTATGATACTCATCCACTTGAGATTTTGCCTGAAGTTTTAAAATATGGGCCCGTGTCCAAGAAAGCTCGTACTGAACCCCTCTCATTGTACACCTGTTTGGAAGCTTTTCTGCGCGAAGAACCTCTGGTGCCTGAAGATATGTGGTACTGTCCCCAATGCAAAGAGAGAAGACAAGCAAGCAAAAAGCTTGACTTGTGGAGGCTCCCAGAGGTTTTGGTCATTCATTTGAAGAGGTTCTCATACAGCAGGTCAATGAAGCATAAACTAGAGACCTTTGTTAACTTCCCGGTTCATGACTTTGACTTAACGAACTATGTAGCCAATAAAAACAATTCTCGGCGTCAGCTGTATGAATTGTATGCCCTCACAAACCATTATGGTAGTATGGGTAGTGGTCATTACACTGCACATATCAAGGTTTTTCCCAATGTGCAGCTCTTAGATGAAAACAGGTGGTACAATTTTGACGACAGCCACATATCACCCATAAGTGAGGATGATGTGAACACTGCAGCTGCCTATGTTCTATTTTACCGGAGGGTGCGGAGTGACGATGATTCTGTTAGCAATGGGGCCTAG 2784 0.4335 MGEMLELSPDEERIMIRDIALSSQSNSKEGDTFFLITQRWWQHWIEYVNQDQSNNSYDGSSFLEYGDLPNSNALKRPAVIDNSDLIDDSVSEDSSTGIDIHDTLLEGRDYVLLPQEVWNQLYAWYGGGPTLPRKVISAGLSQTELAVEVYPLRLQLLMLPRNDRTSIRISKKRNFWQETIGQLHRKACEIFDLPLDQVCIWDYYSRRKNALMNDMDKTLDDANIQMDQDILVEVINNTNNTSSAHENGSAQREASSVLVEPSNSNLSIAGGLSASRVPSRSYNADLSSSQNLNPPARDAENPYGSGVTTRGSVSGLTGLLNLGNTCFMNSAIQCLVHTPEFARYFREDYHQEINWQNPLGMVGELALAFGELLRKLWAPGRTPIAPRPFKAKLARFAPQFSGHNQHDSQELLAFLLDGLHEDLNRVKHKPYIKSRDADGRPDEEVADEYWANHIARNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPLQSTSSRTMTVTVFTCDGTALPSPCTVTVPKQGRCKDLIQALSTACSLKHNERLLLVEVRNHLIHRFLEDPLQLLSTIKDDDHVAVYKIPKIEKNTKYLQLIHRRREQSSDSHTVSGWKPYGTPIVSLISCDDPVTRGDIQVIVNRMLSPLLRKSGNTEHTNTETSITKAAGDNASSDAYATNLVSNSVNKAGRTPTLPLLLIDESNACIDLSMGEDKVVKLPSSSTLLVYIDWSQKLLEKYDTHPLEILPEVLKYGPVSKKARTEPLSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPVHDFDLTNYVANKNNSRRQLYELYALTNHYGSMGSGHYTAHIKVFPNVQLLDENRWYNFDDSHISPISEDDVNTAAAYVLFYRRVRSDDDSVSNGA* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1983 927 Gene3D - 3 149 IPR035927 -
Ahy16g1983 927 Pfam DUSP domain 30 136 IPR006615 GO:0004843
Ahy16g1983 927 MobiDBLite consensus disorder prediction 280 307 - -
Ahy16g1983 927 CDD Peptidase_C19R 754 914 - -
Ahy16g1983 927 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 318 333 IPR018200 GO:0004843|GO:0006511
Ahy16g1983 927 Gene3D Cysteine proteinases 306 544 - -
Ahy16g1983 927 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 6 926 - -
Ahy16g1983 927 Pfam Ubiquitin carboxyl-terminal hydrolase 317 913 IPR001394 GO:0004843|GO:0016579
Ahy16g1983 927 SMART dusp 26 139 IPR006615 GO:0004843
Ahy16g1983 927 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 852 869 IPR018200 GO:0004843|GO:0006511
Ahy16g1983 927 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 317 916 IPR028889 -
Ahy16g1983 927 SUPERFAMILY DUSP-like 7 136 IPR035927 -
Ahy16g1983 927 SUPERFAMILY Cysteine proteinases 315 916 IPR038765 -
Ahy16g1983 927 Gene3D Cysteine proteinases 729 923 - -
Ahy16g1983 927 Gene3D - 150 243 - -
Ahy16g1983 927 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 5 6 926 - -
Ahy16g1983 927 MobiDBLite consensus disorder prediction 280 296 - -
Ahy16g1983 927 ProSiteProfiles DUSP domain profile. 7 136 IPR006615 GO:0004843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1983 Ahy-Chr16 106621188 106629698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1983 763 918 Miscellaneous Gene Families AT4G31670 33.333 3.39e-17 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1983 - - gmx:100794067 1594.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1983 16 106621188 106629698 Ahy6g1704 6 80628592 80637158 hybridization