Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1598 ATGGTTTACACCGTCTCGGGGATTCAGTTCCCCTCGGTTCCTTCGTTGCAGAAATCGTCGCAGCTGAGCTTCTACGATCGAAGGAGCGCTTCGTTCTCATTTCTCCTGAACAGGAACTCCTTCTCTCGGAAAAGTCTCGCTGTAAAATGTTCCCATGATTCTGACTTGTCATCTTCCTCGGTTGCTGAATCTGATAAAGTACTTATTCCTCAAGGTCATGATAACTCTTCAACCACGACTGATGAAGTTGAAGCTCCTGATATAACTTCAGAGGATCCGCAGAAAATACAAGAGTTTACCATGAAAGGTGAGAAAATTGATTATGAAGCAGTTAGCACTGACAAAGATGACAAGGATGGGCAAGGTCATGTTTTGTCATCACATGTGGATGTTGACACCAATACTCAAGCTGAGAATACATCAGTATCTATAAACAAGAAAGTGAAGGTCGAAAGTGAGGAAGCTAGACCAAAGATCATTGCCCCACCTGGCACTGGTCATAAAATATATGAGATTGATCCATCTTTGCAAGCTCACCGTGCTCATCTTGACTTCCGTTATGGACAATATAAGAGATTGCTTGAAGAAATTAACAAGAATGAAGGTGGTCTGGATGCATTTTCTCGTGGTTATGAAAAATTTGGCTTCACCCGCAGTGCTACAGGCATTACTTACAGAGAGTGGGCACCTGGAGCAACGTCAGCAGCATTAATTGGAGATTTCAACAACTGGAATCCAAACGCAGATGTAATGACTCGGAATGAGTTTGGTGTATGGGAGATCTTCTTGCCAAACAATGTGGATGGTTCACTGCCAATTCCTCATGGTTCTCGAGTCAAGATCCGCATGGAAACTCCGTCTGGAATCAAAGATTCAATCCCTGCTTGGATAAAGTTCTCTGTACAGGCTCCTGGTGAAATTCCATATAATGGTATATACTATGATCCACCAGAAGAGGAAAAATATGTCTTCAAATATCCACAGCCAAAGAGACCAAAATCACTTAGAATATATGAATCACATGTTGGAATGAGTAGTCCGGAACCAAAAATCAATACGTATGTCAACTTTAGAGATGAAGTGCTACCTCGCATTAAAAGGCTTGGCTATAATGCTGTCCAGATTATGGCTATTCAAGAGCATTCTTATTATGCTAGCTTTGGGTACCATGTTACAAATTTCTTTGCACCTAGCAGCCGGTTTGGAACTCCGGATGATCTCAAGTCTCTCATAGACAAAGCCCATGAATTAGGCCTGCTTGTTCTGATGGATATTGTACATAGTCATGCATCAAATAATACACTGGATGGGCTGAACATGTTTGATGGAACTGATACTCATTACTTCCATGGTGGGTCACGAGGTTATCATTGGATGTGGGATTCTCGTCTTTTTAACTATGGAAGCTGGGAGGTTCTAAGGTATCTGCTTTCAAATGCAAGATGGTGGCTGGAAGAATATAAGTTTGATGGGTTTCGATTTGATGGTGTCACATCAATGATGTATACTCATCATGGATTGGGGGTTGGTTTTACTGGAAATTACAATGAGTACTTCGGTTTTGCAACTGATGTTGATGCTGTGGTTTACCTGATGCTGGTTAATGATGTCATTCATGGGCTCTTTCCTGAGGCTGTTACTATTGGTGAAGATGTCAGTGGAATGCCAACATTTTGCCTTCCTACACAAGATGGTGGGGTTGGCTTTGACTACCGCCTGCACATGGCCATTGCAGACAAGTGGATTGAGATTCTCAAGAAGAAAGATGAAGACTGGGAAATGGGTGATATAGTTCACACTCTCACAAACAGAAGGTGGCTAGAAAAATGTGTAGCATATGCTGAAAGTCATGACCAAGCTTTGGTTGGGGACAAGACAATTGCATTTTGGTTGATGGACAAGGATATGTATGACTTCATGGCCTTAGATAGACCATCTACTCCTCTCATAGATCGTGGTATAGCACTACACAAGATGATTAGGCTTATCACAATGGGTCTTGGTGGGGAAGGGTATTTGAATTTTATGGGGAATGAATTTGGCCATCCTGAGTGGATTGATTTTCCAAGGGGTGATCAACATCTTCCTACTGGTGCAGTAATTCCCGGGAATAATTACAGTTATGATAAATGTAGGCGTAGATTTGACTTGGGGGATGCAGACTATCTTAGATATAGGGGGATGCAAGAATTTGATCAGGCTATGCAGCATCTGGAAGAAAGGTTTGGTATTGTCTTGGATTCAGATGATCCCTTGTTTGGTGGCTTCAACAGACTCAATCCCACAGCCGAGTACTTCACCTCTGATGGATGGTATGACGGCCGACCCCGATCTTTTCTCGTGTATGCACCTTCTAGAACAGCTGTGGTGTATGCCCTCGCAGATGAAGCTGAGCCAGAGCCAACGCTAAAACCAGTTGAAGTCCTAAAACCAGTTGAAGTGCTAGTGATGGAACCAGAGCTAGAGCCAGAGCCAAAGCAAGTGCTAGAGTCAGAGTCAAAGCCAGAGCCAGTTGAAGCAGAAGTTGAACCCTGA 2535 0.43 MVYTVSGIQFPSVPSLQKSSQLSFYDRRSASFSFLLNRNSFSRKSLAVKCSHDSDLSSSSVAESDKVLIPQGHDNSSTTTDEVEAPDITSEDPQKIQEFTMKGEKIDYEAVSTDKDDKDGQGHVLSSHVDVDTNTQAENTSVSINKKVKVESEEARPKIIAPPGTGHKIYEIDPSLQAHRAHLDFRYGQYKRLLEEINKNEGGLDAFSRGYEKFGFTRSATGITYREWAPGATSAALIGDFNNWNPNADVMTRNEFGVWEIFLPNNVDGSLPIPHGSRVKIRMETPSGIKDSIPAWIKFSVQAPGEIPYNGIYYDPPEEEKYVFKYPQPKRPKSLRIYESHVGMSSPEPKINTYVNFRDEVLPRIKRLGYNAVQIMAIQEHSYYASFGYHVTNFFAPSSRFGTPDDLKSLIDKAHELGLLVLMDIVHSHASNNTLDGLNMFDGTDTHYFHGGSRGYHWMWDSRLFNYGSWEVLRYLLSNARWWLEEYKFDGFRFDGVTSMMYTHHGLGVGFTGNYNEYFGFATDVDAVVYLMLVNDVIHGLFPEAVTIGEDVSGMPTFCLPTQDGGVGFDYRLHMAIADKWIEILKKKDEDWEMGDIVHTLTNRRWLEKCVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPLIDRGIALHKMIRLITMGLGGEGYLNFMGNEFGHPEWIDFPRGDQHLPTGAVIPGNNYSYDKCRRRFDLGDADYLRYRGMQEFDQAMQHLEERFGIVLDSDDPLFGGFNRLNPTAEYFTSDGWYDGRPRSFLVYAPSRTAVVYALADEAEPEPTLKPVEVLKPVEVLVMEPELEPEPKQVLESESKPEPVEAEVEP* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1598 844 SMART aamy 352 712 IPR006047 GO:0005975
Ahy6g1598 844 MobiDBLite consensus disorder prediction 55 90 - -
Ahy6g1598 844 CDD E_set_GBE_euk_N 221 314 - -
Ahy6g1598 844 MobiDBLite consensus disorder prediction 820 844 - -
Ahy6g1598 844 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 2-1, CHLOROPLASTIC/AMYLOPLASTIC 4 744 - -
Ahy6g1598 844 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 2-1, CHLOROPLASTIC/AMYLOPLASTIC 742 798 - -
Ahy6g1598 844 CDD AmyAc_bac_euk_BE 318 733 - -
Ahy6g1598 844 Gene3D Glycosidases 173 737 - -
Ahy6g1598 844 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 742 798 IPR037439 GO:0003844|GO:0005978
Ahy6g1598 844 SUPERFAMILY E set domains 207 316 IPR014756 -
Ahy6g1598 844 SUPERFAMILY (Trans)glycosidases 326 740 IPR017853 -
Ahy6g1598 844 MobiDBLite consensus disorder prediction 55 84 - -
Ahy6g1598 844 Pfam Alpha amylase, C-terminal all-beta domain 740 792 IPR006048 GO:0003824|GO:0005975|GO:0043169
Ahy6g1598 844 Gene3D Immunoglobulins 209 321 IPR013783 -
Ahy6g1598 844 Gene3D - 738 796 IPR013780 -
Ahy6g1598 844 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 4 744 IPR037439 GO:0003844|GO:0005978
Ahy6g1598 844 SUPERFAMILY Glycosyl hydrolase domain 740 794 - -
Ahy6g1598 844 Pfam Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 213 296 IPR004193 GO:0004553|GO:0005975
Ahy6g1598 844 Pfam Alpha amylase, catalytic domain 362 434 IPR006047 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1598 Ahy-Chr6 66979299 66995282 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1598 29 795 Glycoside Hydrolase AT5G03650 70.889 0.0 1188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1598 K00700 - gmx:100785968 1380.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1839 16 94531385 94547737 Ahy6g1598 6 66979299 66995282 hybridization