Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1839 ATGGTTTACACCGTCTCGGGGATTCGGTTCCCCTCGGTTCCTTCGTTGCAGAAATCGTCGCAGCTGAGCTTCCACGATCGAAGGAGCGCTTCGTTCTCATTTCTCCTGAACAGGAACTCCTTCTCTCGGAAAAGTCTCGCTGTAAAATGTTCCCATGATTCTGACTTGTCATCTTCCACGGTTGCTGAATCTGATAAAGTACTTATTCCTCAAGGTCACGATAACTCTTCAACCACGACTGATGAAGTTGAAGCTCCTGATATAACTTCAGAGGATCCGCAGAAAATACAAGAGTTAACCATGAAAGGTGAGAAAATTGATTATGAAGCAGTTAGCACTGACAAAGATGACAAGGATGGGCAAGGTCATGTTTTGTCATCACATGTGGATGTTGACACCAATACTCAAGCTGAGAATACATCAGTATCTATAAACAAGAAAGTGAAGGTCGAAAGTGAGGAAGCTAGACCAAAGATCATTGCCCCACCTGGCACTGGTCATAAAATATATGAGATTGATCCATCTTTGCAAGCTCACCGTGCTCATCTTGACTTCCGTTATGGACAATATAAGAGATTGCATGAAGAAATTAACAAGTATGAAGGTGGTCTGGATGCATTTTCTCGTGGTTATGAAAAATTTGGCTTCACCCGCAGTGCTACAGGCATTACTTACAGAGAGTGGGCACCTGGAGCAACGTCAGCAGCATTAATTGGAGATTTCAACAACTGGAATCCAAATGCAGATGTAATGACTCGGAATGAGTTTGGTGTATGGGAGATCTTCTTGCCAAACAATGTGGATGGTTCACTGCCAATTCCTCATGGTTCTCGAGTCAAGATCCGCATGGAAACTCCGTCTGGAATCAAAGATTCAATCCCTGCTTGGATAAAGTTCTCTGTACAGGCTCCTGGTGAAATTCCATATAATGGTATATACTATGATCCACCAGAAGAGGAAAAATATGTCTTCAAATATCCACAGCCAAAGAGACCAAAATCACTTAGAATATATGAATCACATGTTGGAATGAGTAGTTCGGAACCAAAAATCAATACGTATGTCAACTTTAGAGATGAAGTGCTACCTCGCATTAAAAGGCTTGGCTATAATGCTGTCCAGATTATGGCTATTCAAGAGCATTCTTATTATGCTAGCTTTGGGTACCATGTTACAAATTTCTTTGCACCTAGCAGCCGGTTTGGAACTCCGGATGATCTCAAGTCTCTCATAGACAAAGCCCATGAATTAGGCCTGCTTGTTCTGATGGATATTGTACATAGTCATGCATCAAATAATACACTGGATGGGCTGAACATGTTTGATGGAACTGATACTCATTACTTCCATGGTGGGTCACGAGGTTATCATTGGATGTGGGATTCTCGTCTTTTTAACTATGGAAGCTGGGAGGTTCTAAGGTATCTGCTTTCAAATGCAAGATGGTGGCTGGAAGAATATAAGTTTGATGGGTTTCGATTTGATGGTGTCACATCAATGATGTATACTCATCATGGATTGGGGGTTGGTTTTACTGGAAATTACAATGAGTACTTCGGTTTTGCAACTGATGTTGATGCTGTGGTTTACCTGATGCTGGTTAATGATGTCATTCATGGGCTCTTTCCTGAAGCTATTACTATTGGTGAAGATGTCAGTGGAATGCCAACATTTTGCCTTCCTACACAAGATGGTGGGGTTGGCTTTGACTACCGCCTGCACATGGCCATAGCAGACAAGTGGATTGAGATTCTCAAGAAGAAAGATGAAGACTGGGAAATGGGTGATATAGTTCACTCTCTCACAAACAGAAGGTGGCTAGAAAAATGTGTAGCATATGCTGAAAGTCATGACCAAGCTTTGGTTGGGGACAAGACAATTGCATTTTGGTTGATGGACAAGGATATGTATGACTTCATGGCCTTAGATAGACCATCTACTCCTCTCATAGATCGTGGTATAGCACTACACAAGATGATTAGGCTTATCACAATGGGTCTTGGTGGGGAAGGGTATTTGAATTTTATGGGGAATGAATTTGGCCATCCTGAATGGATTGATTTTCCAAGGGGTGATCAACATCTTCCTACTGGTGCAGTAATTCCCGGGAATAATTACAGTTATGATAAATGTAGGCGTAGATTTGACTTGGGGGATGCAGACTATCTTAGATATAGGGGGATGCAAGAATTTGATCAAGCTATGCAGCATCTGGAAGAAAGGTTTGGTTTCATGACTTCTGAGCACCAATATATTTCTCGGAAACATGAGGGTGACAAAGTTATAGTGTTCGAAAGGGGCAAACTTGTATTTGTCTTCAATTTTCATTGGTACAACAGCTATTCAGATTACAGAGTTGGATGCTTAAACCCAGGGAAATACAAGATTGTCTTGGATTCAGATGATCCCTTGTTTGGTGGCTTCAATAGACTCAATCCCACAGCCGAGTACTTCACCTCTGATGGATGGTATGACGACCGACCCCGATCTTTTCTCGTGTATGCACCTTCTAGAACAGCTGTGGTGTATGCCCTCGCAGATGAAGCTGAACCAGAGCCAAAGCTAAAACCAGTTGAAGTGCTAGTGATGGAACCAGAGCTAGAGCCAGAGCCAAAGCAAGTGCTAGAGTCAGAGTCAAAGCCAGAGCCAGTTGAAGCAGAAGTTGAACCCTGA 2673 0.4246 MVYTVSGIRFPSVPSLQKSSQLSFHDRRSASFSFLLNRNSFSRKSLAVKCSHDSDLSSSTVAESDKVLIPQGHDNSSTTTDEVEAPDITSEDPQKIQELTMKGEKIDYEAVSTDKDDKDGQGHVLSSHVDVDTNTQAENTSVSINKKVKVESEEARPKIIAPPGTGHKIYEIDPSLQAHRAHLDFRYGQYKRLHEEINKYEGGLDAFSRGYEKFGFTRSATGITYREWAPGATSAALIGDFNNWNPNADVMTRNEFGVWEIFLPNNVDGSLPIPHGSRVKIRMETPSGIKDSIPAWIKFSVQAPGEIPYNGIYYDPPEEEKYVFKYPQPKRPKSLRIYESHVGMSSSEPKINTYVNFRDEVLPRIKRLGYNAVQIMAIQEHSYYASFGYHVTNFFAPSSRFGTPDDLKSLIDKAHELGLLVLMDIVHSHASNNTLDGLNMFDGTDTHYFHGGSRGYHWMWDSRLFNYGSWEVLRYLLSNARWWLEEYKFDGFRFDGVTSMMYTHHGLGVGFTGNYNEYFGFATDVDAVVYLMLVNDVIHGLFPEAITIGEDVSGMPTFCLPTQDGGVGFDYRLHMAIADKWIEILKKKDEDWEMGDIVHSLTNRRWLEKCVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPLIDRGIALHKMIRLITMGLGGEGYLNFMGNEFGHPEWIDFPRGDQHLPTGAVIPGNNYSYDKCRRRFDLGDADYLRYRGMQEFDQAMQHLEERFGFMTSEHQYISRKHEGDKVIVFERGKLVFVFNFHWYNSYSDYRVGCLNPGKYKIVLDSDDPLFGGFNRLNPTAEYFTSDGWYDDRPRSFLVYAPSRTAVVYALADEAEPEPKLKPVEVLVMEPELEPEPKQVLESESKPEPVEAEVEP* 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1839 890 MobiDBLite consensus disorder prediction 54 91 - -
Ahy16g1839 890 CDD E_set_GBE_euk_N 221 314 - -
Ahy16g1839 890 SUPERFAMILY (Trans)glycosidases 326 740 IPR017853 -
Ahy16g1839 890 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 2-1, CHLOROPLASTIC/AMYLOPLASTIC 4 850 - -
Ahy16g1839 890 SUPERFAMILY E set domains 207 316 IPR014756 -
Ahy16g1839 890 CDD AmyAc_bac_euk_BE 318 733 - -
Ahy16g1839 890 MobiDBLite consensus disorder prediction 54 84 - -
Ahy16g1839 890 Gene3D Immunoglobulins 209 321 IPR013783 -
Ahy16g1839 890 Pfam Alpha amylase, catalytic domain 362 434 IPR006047 GO:0005975
Ahy16g1839 890 Pfam Alpha amylase, C-terminal all-beta domain 751 844 IPR006048 GO:0003824|GO:0005975|GO:0043169
Ahy16g1839 890 SUPERFAMILY Glycosyl hydrolase domain 747 846 - -
Ahy16g1839 890 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 4 850 IPR037439 GO:0003844|GO:0005978
Ahy16g1839 890 SMART aamy 352 712 IPR006047 GO:0005975
Ahy16g1839 890 Gene3D Glycosidases 173 742 - -
Ahy16g1839 890 Pfam Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 213 296 IPR004193 GO:0004553|GO:0005975
Ahy16g1839 890 MobiDBLite consensus disorder prediction 866 890 - -
Ahy16g1839 890 Gene3D - 747 854 IPR013780 -
Ahy16g1839 890 PIRSF GlgB 80 854 IPR037439 GO:0003844|GO:0005978
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1839 Ahy-Chr16 94531385 94547737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1839 29 847 Glycoside Hydrolase AT5G03650 75.761 0.0 1302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1839 K00700 - gmx:100816963 1517.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1839 16 94531385 94547737 Ahy16g1839 16 94531385 94547737 ECH
Ahy16g1839 16 94531385 94547737 Ahy6g1598 6 66979299 66995282 hybridization