Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1533 ATGTTCAGATTCTGGGGATCACAAGAGCAACAACCTCAGCACGATGGTTCTTCATCGCAGTCGTGGTATCCTCCATCGGTGATGAGCACGCCGAGCTCATCGAGGCCTGCCACACCCTCCGCCGCTTCCTCCACTGGCTACGCTTCTCCGAGGATACACCCTTCGTCGCATGTTCCGCCTGCCGAAGCTGCCGGCGTCATTGCCGCCTTGAAAGACAAGAGTATCGACGAGTTGAGGAAGATGTTGTCCGACAAGGATACTTATCAACAGTTCCTAAATTCGCTTGATATGGTCAAGACTCAAAATAATCTGAAAGATGAACTTTGCAAAGAGAATTTGCAGCTAGCGGAGGAAAATCTAAAAAGGGAACCTCGGATAATGGAACTCAGGAATCAAAGTAGCATTATTCGGACAACTGAGTTAGCTGCTGCTAAAGAGAAACTAAGCGAGCTTGAGAAACAGAAAGAAGAAATGCTGAAGATGAATTCCCCAGCATCCCTTATCCACAGGATTCAAGAGTCTATGAATAAGACAGATGAGGAATCTGAAAATCTACACCAGAAAATACTTGACAGAGAGATTGACCTTGCAGCATTTTTGCAGCATTACAAGAAGCTACGTATCGCTTACCACCGTAAAAGTCTCATACATCTTGCTGCCAAGACATCAAATATATGA 678 0.4558 MFRFWGSQEQQPQHDGSSSQSWYPPSVMSTPSSSRPATPSAASSTGYASPRIHPSSHVPPAEAAGVIAALKDKSIDELRKMLSDKDTYQQFLNSLDMVKTQNNLKDELCKENLQLAEENLKREPRIMELRNQSSIIRTTELAAAKEKLSELEKQKEEMLKMNSPASLIHRIQESMNKTDEESENLHQKILDREIDLAAFLQHYKKLRIAYHRKSLIHLAAKTSNI* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1533 225 MobiDBLite consensus disorder prediction 1 51 - -
Ahy6g1533 225 ProSiteProfiles VPS37 C-terminal domain profile. 145 225 IPR009851 -
Ahy6g1533 225 PANTHER WILLIAMS-BEUREN SYNDROME CRITICAL REGION PROTEIN-RELATED 1 225 - -
Ahy6g1533 225 Coils Coil 168 188 - -
Ahy6g1533 225 Pfam Modifier of rudimentary (Mod(r)) protein 71 215 IPR009851 -
Ahy6g1533 225 PANTHER VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 37 HOMOLOG 2 1 225 - -
Ahy6g1533 225 MobiDBLite consensus disorder prediction 1 59 - -
Ahy6g1533 225 SUPERFAMILY Endosomal sorting complex assembly domain 164 213 IPR037202 -
Ahy6g1533 225 Coils Coil 141 161 - -
Ahy6g1533 225 Gene3D Helix hairpin bin 149 217 IPR029012 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1533 Ahy-Chr6 51668918 51672098 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1533 K12185 - gmx:100305851 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy6g1533 6 51668918 51672098 Ahy12g3006 12 119651814 119653868 PCT
Ahy6g1533 6 51668918 51672098 Ahy2g2591 2 102053889 102055943 PCT
Ahy12g3006 12 119651814 119653868 Ahy6g1533 6 51668918 51672098 PCT
Ahy2g2591 2 102053889 102055943 Ahy6g1533 6 51668918 51672098 PCT