LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy6g1477	ATGGGAGGGAAAACAGATCAGCCAAAGAATGACACGGAGAAGAAGACCGAAGGCGGAGGGAACAAAAACGACGCTCCCTCCACTGTCGTATTGAAGCTAGACATGCATTGTGAGGGATGCGTTAAGAAAATCAAACGCGCCGTTCGCCACTTTGACGGTGTGGAAGACGTGAAGGCCGACATCTCCTCTAACAAACTAACCGTCTTCGGAAAAGTGGACCCCGCTAGTGTTCGGGACAGGCTGGCCGAGAAAACCAACAAGAAGGTTGAGCTCCTCTCCCCTCAGCCCAAGAAAGACTCCCCCGCCGCCGATAATAAACCGCCGCCGGAGAAGAAGCCCGATGACAAGAAACCGGAAGCCAAAAAGCCCGAAGAGAAAAAGCCTAAAGAGAGCACAGTGGCGTTGAAGATCAGATTGCACTGTGACGGTTGCATTCAGAAAATTCGCAAGATTATCCTCAAGATCAAAGGAGTGGAATCGGTGAACATTGAAGAAGGGAAGGATTTGGTAACCGTTACGGGAACCATGGACGTGAAGGAAATGGTGCCGTTCCTGAACGAGAAGCTCAAGAGGAACGTTGAGATGATGGGCCCACCCAAGAAAGAAGAAGATAAAAAAAACAAAGAAGGAGGAGGGGAAAAGAAAGTGAAGAAAGAAGGTGGTGGTGGTCGCGGCGGAGGAGACGTTGGGAAGAAGGCGGTGGTGGAGGAAGGTGGGACCAAGGCAGTGGAAATTAACAAAATGGAGCACTCCGGTTACGGGTACCCACCTGCTCCTATGTATTGGTACGATGGGTATGGACCTGGTCAAACTAGTACTAGCTACGCGGTGGAGGTTAACCCTTCTTCATCAGGGGCCGGGTACCCTAATAATCAAGGGTACCCTTATGATTATTGGGGTTATGGAGGGGGCCATGATGTTAATCATCATAATAATCAAGGGTATACCGAGCCACCCCCTTATTACATGCACCCTCGTTATCCTGCTCCTCAGATGTTCAGCGACGAGAATCCCAATGCTTGTTCCCTCATGTGA	1035	0.5024	MGGKTDQPKNDTEKKTEGGGNKNDAPSTVVLKLDMHCEGCVKKIKRAVRHFDGVEDVKADISSNKLTVFGKVDPASVRDRLAEKTNKKVELLSPQPKKDSPAADNKPPPEKKPDDKKPEAKKPEEKKPKESTVALKIRLHCDGCIQKIRKIILKIKGVESVNIEEGKDLVTVTGTMDVKEMVPFLNEKLKRNVEMMGPPKKEEDKKNKEGGGEKKVKKEGGGGRGGGDVGKKAVVEEGGTKAVEINKMEHSGYGYPPAPMYWYDGYGPGQTSTSYAVEVNPSSSGAGYPNNQGYPYDYWGYGGGHDVNHHNNQGYTEPPPYYMHPRYPAPQMFSDENPNACSLM*	345

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy6g1477	344	MobiDBLite	consensus disorder prediction	195	232	-	-
	Ahy6g1477	344	PANTHER	HEAVY METAL-ASSOCIATED DOMAIN PROTEIN	1	344	-	-
	Ahy6g1477	344	Pfam	Heavy-metal-associated domain	137	194	IPR006121	GO:0046872
	Ahy6g1477	344	Pfam	Heavy-metal-associated domain	33	85	IPR006121	GO:0046872
	Ahy6g1477	344	ProSiteProfiles	Heavy-metal-associated domain profile.	35	68	IPR006121	GO:0046872
	Ahy6g1477	344	SUPERFAMILY	HMA, heavy metal-associated domain	28	91	IPR036163	GO:0046872
	Ahy6g1477	344	ProSiteProfiles	Heavy-metal-associated domain profile.	139	202	IPR006121	GO:0046872
	Ahy6g1477	344	MobiDBLite	consensus disorder prediction	103	131	-	-
	Ahy6g1477	344	PANTHER	HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6	1	344	IPR044594	GO:0046872
	Ahy6g1477	344	Gene3D	-	129	202	-	-
	Ahy6g1477	344	Gene3D	-	25	99	-	-
	Ahy6g1477	344	MobiDBLite	consensus disorder prediction	84	131	-	-
	Ahy6g1477	344	CDD	HMA	35	90	IPR006121	GO:0046872
	Ahy6g1477	344	MobiDBLite	consensus disorder prediction	1	27	-	-
	Ahy6g1477	344	SUPERFAMILY	HMA, heavy metal-associated domain	132	187	IPR036163	GO:0046872

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy6g1477	Ahy-Chr6	38928853	38930934	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy6g1477	-		-	gmx:100795652	343.969

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy16g1639	16	47520554	47522832	Ahy6g1477	6	38928853	38930934	hybridization
	Ahy6g1477	6	38928853	38930934	Ahy12g3050	12	120025242	120027619	PCT
	Ahy6g1477	6	38928853	38930934	Ahy2g2635	2	102427317	102429694	PCT
	Ahy12g3050	12	120025242	120027619	Ahy6g1477	6	38928853	38930934	PCT
	Ahy2g2635	2	102427317	102429694	Ahy6g1477	6	38928853	38930934	PCT