Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g3050 ATGGGAGAGAAGCAAAAGGAGCAGCCAAAGAATGAAACGGAGGAGAAGAAGCCGTCGTCTGAAGAACCAAAGAAAAACGACACACCCGCTCCTGTCGTTTACAAGCTTGACTTGCATTGCGAGGGATGTATTAAGAAAATCAAAAGAACCGTTCGCCATTTTGATGGTGTGGAGGATGTCAAGGCTGATTTAACGGCTAACAAGTTAACGGTCACCGGAAACGACGTTGACGCCGTTAAGCTTCAAGAGAAGCTTATCGTCAGAACTAAGAAGAAGGTTGAGCTACTAACCCCTCCGCCGCCAAAGAAGGAAGCCGCTCCTCCTCCTCCTGCGCCTCCGGCCGAGGGAGAAAAGAAATCCGATGAGAAGAAGCCACCTAAAGAGAGCACGGTGGTTTTGAAGATCAGATTGCACTGTGACGGTTGCATTGCGAAAATTAGAAGAATCATCCAGAAGTTCAACGGTGTTGATTCGGTGAGCATTGATGGAGGTAAAGATTTGGTGACGGTGAAGGGAACCATGGATGTGAAGGAACTGGTGCCCTATTTGAACGATAAGCTCAAGAGGAACGTGGAGGTGGTTGCACCGAAGAAAGATGAGGAAAAGAAAGAAAAAGACGGCGGGGATGCCGGTGCCGGTGAAAAGAAAGAGAGCAAAGAAGCCGCCAGCGACAAAAAAGACAGCGGAGATAAAAAAGAAAGTGGAGGAGGAGGAGACGGTGACAAGAAAGAAAAAGCAGCAGCGACAACAGTGACAGCGACGACAGAAACAAAGAGTGAAGTTAACAAAATGGAATACCACGGGTACCCGTTGCCATCCCCAATTTATTGGCACAACAATAATGAAAATTTTCATCAAGGTCAAACAAGTTATGCTATGGAGGTTCACCCTGGGTATGCAAACCATGGGTACCACTATATGGAGCCACCACAAGGATACATGACCCAAGGGTATGTGATGAACCATAATCAAGGGTATCATCATGTTGAGCCAGGTCCATTACCATTCTACATGAACCCTAACCAACCTCACCCTCAGATGTTCAGTGATGAGAACCCTAATGCTTGTTCCCTCATGTGA 1080 0.4694 MGEKQKEQPKNETEEKKPSSEEPKKNDTPAPVVYKLDLHCEGCIKKIKRTVRHFDGVEDVKADLTANKLTVTGNDVDAVKLQEKLIVRTKKKVELLTPPPPKKEAAPPPPAPPAEGEKKSDEKKPPKESTVVLKIRLHCDGCIAKIRRIIQKFNGVDSVSIDGGKDLVTVKGTMDVKELVPYLNDKLKRNVEVVAPKKDEEKKEKDGGDAGAGEKKESKEAASDKKDSGDKKESGGGGDGDKKEKAAATTVTATTETKSEVNKMEYHGYPLPSPIYWHNNNENFHQGQTSYAMEVHPGYANHGYHYMEPPQGYMTQGYVMNHNQGYHHVEPGPLPFYMNPNQPHPQMFSDENPNACSLM* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g3050 359 CDD HMA 137 172 IPR006121 GO:0046872
Ahy12g3050 359 MobiDBLite consensus disorder prediction 198 259 - -
Ahy12g3050 359 ProSiteProfiles Heavy-metal-associated domain profile. 38 85 IPR006121 GO:0046872
Ahy12g3050 359 SUPERFAMILY HMA, heavy metal-associated domain 129 185 IPR036163 GO:0046872
Ahy12g3050 359 MobiDBLite consensus disorder prediction 100 114 - -
Ahy12g3050 359 MobiDBLite consensus disorder prediction 198 246 - -
Ahy12g3050 359 CDD HMA 38 94 IPR006121 GO:0046872
Ahy12g3050 359 MobiDBLite consensus disorder prediction 115 129 - -
Ahy12g3050 359 MobiDBLite consensus disorder prediction 1 24 - -
Ahy12g3050 359 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 225 359 - -
Ahy12g3050 359 MobiDBLite consensus disorder prediction 92 129 - -
Ahy12g3050 359 MobiDBLite consensus disorder prediction 1 32 - -
Ahy12g3050 359 ProSiteProfiles Heavy-metal-associated domain profile. 137 212 IPR006121 GO:0046872
Ahy12g3050 359 Pfam Heavy-metal-associated domain 37 85 IPR006121 GO:0046872
Ahy12g3050 359 Pfam Heavy-metal-associated domain 134 192 IPR006121 GO:0046872
Ahy12g3050 359 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 1 222 IPR044594 GO:0046872
Ahy12g3050 359 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 225 359 IPR044594 GO:0046872
Ahy12g3050 359 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 222 - -
Ahy12g3050 359 Gene3D - 29 103 - -
Ahy12g3050 359 Gene3D - 127 201 - -
Ahy12g3050 359 SUPERFAMILY HMA, heavy metal-associated domain 33 85 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g3050 Ahy-Chr12 120025242 120027619 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g3050 - - aip:107626477 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g3050 12 120025242 120027619 Ahy12g3050 12 120025242 120027619 ECH
Ahy12g3050 12 120025242 120027619 Ahy2g2635 2 102427317 102429694 hybridization
Ahy16g1639 16 47520554 47522832 Ahy12g3050 12 120025242 120027619 PCT
Ahy6g1477 6 38928853 38930934 Ahy12g3050 12 120025242 120027619 PCT
Ahy12g3050 12 120025242 120027619 Ahy16g1639 16 47520554 47522832 PCT
Ahy12g3050 12 120025242 120027619 Ahy6g1477 6 38928853 38930934 PCT