Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1434 ATGGATGCCAAAGCCATGAAACTCCAGATCCTGAAGGGGTCCATAGCGAGGCGCGTGTTCTTCCGCTCAATCATGCTCGCCTCCGCCATCTCGATCGTTTCTCTGCTCCGCGCCTTCTCCGCCTTCGACTTGGCTGACTTAGCTCCGGTGACACTGACCTACACCGACTGCGTCGCCGCGGGTTCCCAAATGCGTTTCGAAAACGCCACTCTCCAGAGCCGCGTGCTCAGCACTTTCTGGAGCTCCTTCTACTGCGAGAAAGACGAAAACTTGACGGTCAACGTGGTCAACGACCTTATGAAGAAGCAACTGTTGGATTGCGGAGCCAAGAGCCTCTGCGTCGGAGAAGGTTCGGCGATGGCCGTCGCCGCCATGAAGCACATGGGATTCTCCAGCGTTACCGGTGTCCACAGGCACCGGTTCTTCTCCCTCAAGCAGAAGAAAATCGTGTACGAGCTCAATTACCAGGACTGTTCATTCGATTTCGTGCTGTCAAGGGATCTTGACAAGGTTTCTGTTCCTGCGTTGCTCGTTCTTGAGGTTGAGCGTGTTCTAAAGCCAGGTGGTGTCGGTGCCCTTCTTGTGGGTCCCACTGGCTCCAATTCCATCCCCAACGACCTCATTAGGTCTGCAACACCGGTTTCATCGTTGCTAAGATCTTCCACCGTTCTGCATGTTGGCTCTGTTGGTGATCTCAACCTTGTTGTGTTCAGGAAAAGGGTGGCAAATGATACTACTTCTGGTGCTTTCTATCAGTATCCACTTCCTGCGGATTGTTCTAGCATAAGTCTTACAAAGCCTTTGATTCAGCTTATGGAGTCTCTTGTGAGTCAGAAGCCGCCACTTGGGTATGAGAAGATGGTACCTTACTTGCCAAAGTTCGTGGATGTTTCTTCTAGGAAGAGGATGGTTTATATTGATATTAATGGGGGGCGAGAGATCCGCAATGCTGATGATAATCCTAGTGATTGGTTCTTGCCATCTTACCCTATTAGTCAAAAGGATTTCAATGTGTATTTTGTTCACTATAACACTTCTGTAATGTTGTCCTATGTGAAGCGACCTGGTGTGACATTTGTTTACTATCCCGGGTTGGCCGGTAAGGCCGCGGCCAAGGCTAATCTTGATGCTGCTGACGATGATGATGGAGATTTGGAACCGTTTGTTGGGGAGGACGAGTTTGATTTCCTTGCTTGGTTCAAGGAAACTGTGCAGTATGCTGATTTTGTTGTCCTCAAAATGAATGCAGGGAATGCTGAAATGAAGTTCCTCTTGGATGTGTTTGAGAGTGGAGCAATATGCTTTGTGGATGAATTGTTTCTGAGGTGCCCAGAGAGTGGAAATGACGATGAGAAAACTGTTATTGGCAAGGATAGCTGCATGGATATTTACAAGGGTCTCAGAAGCAATGGTGTCTACGTTCATCAGTGGTGGGCGGACTAA 1443 0.49 MDAKAMKLQILKGSIARRVFFRSIMLASAISIVSLLRAFSAFDLADLAPVTLTYTDCVAAGSQMRFENATLQSRVLSTFWSSFYCEKDENLTVNVVNDLMKKQLLDCGAKSLCVGEGSAMAVAAMKHMGFSSVTGVHRHRFFSLKQKKIVYELNYQDCSFDFVLSRDLDKVSVPALLVLEVERVLKPGGVGALLVGPTGSNSIPNDLIRSATPVSSLLRSSTVLHVGSVGDLNLVVFRKRVANDTTSGAFYQYPLPADCSSISLTKPLIQLMESLVSQKPPLGYEKMVPYLPKFVDVSSRKRMVYIDINGGREIRNADDNPSDWFLPSYPISQKDFNVYFVHYNTSVMLSYVKRPGVTFVYYPGLAGKAAAKANLDAADDDDGDLEPFVGEDEFDFLAWFKETVQYADFVVLKMNAGNAEMKFLLDVFESGAICFVDELFLRCPESGNDDEKTVIGKDSCMDIYKGLRSNGVYVHQWWAD* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1434 480 PANTHER UPSTREAM ORF PROTEIN, PUTATIVE-RELATED 1 480 - -
Ahy6g1434 480 PANTHER PEPTIDE UPSTREAM PROTEIN 1 480 - -
Ahy6g1434 480 Pfam Methyltransferase domain 150 190 IPR013216 GO:0008168
Ahy6g1434 480 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 104 197 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1434 Ahy-Chr6 29593891 29596088 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1434 - - gmx:100783651 573.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1595 16 40783489 40785595 Ahy6g1434 6 29593891 29596088 hybridization
Ahy6g1434 6 29593891 29596088 Ahy12g3093 12 120383909 120385950 PCT
Ahy6g1434 6 29593891 29596088 Ahy2g2676 2 102785984 102788025 PCT
Ahy12g3093 12 120383909 120385950 Ahy6g1434 6 29593891 29596088 PCT
Ahy2g2676 2 102785984 102788025 Ahy6g1434 6 29593891 29596088 PCT