Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g3093 ATGCTTATATTATACATACATATGGATTCTTCCAAGGCCTTCTTCTCCCACTCTTCCTTCAAAGCATCCATAGCCAAGACACTCTTCTTCCGTGCACTCTTCCTTGCCTCTGCTATCTCCTTGCTTTCCTTGCTCCGATTCCTTCCTACTCTCCACTTCCTCTCAGCCTCACTCGCCCCTGAAACACACCTTCAGTGTCTCAACCAAAACACTTCTGGCTCTTACTTGTTCCAGAGCAGGGTCTACAACTCCTTCTGGGACTCCTTCAACTGCATCAACCATGCCAACTTCACTACCTCTGCTGTCAATCACCTATTGCGTAACCACTTCTTGAACCGTAAAGCTACCTCCCTCTGCGTTGGACAACCCTCACCAATGCCTGCTGTCTCTGCAATGCGACAACTTGGCTTCACTAGTGTCACCGCTGTCTCCCTAAGCCACAACACACTCTTGTCTCAGCTTCACTATCAGGACTCTTCCTTTGACTTCGTCTTCACCAAGGATGTGGACAAGGTTTCTGTGCCTGCATTGCTGCTGCTTGAGGTGGAGCGGGTCCTCAAGCCTGGGGGAATTGGCGCACTGCTTATACGTCCCAATCATGCTCCTTCTTCCTCAGTTTCATCCATGTTGAGATCTTCAAGTGTTGTGGATGTCACTCTTGTCAACGGCATTACCCTTGTGGTTTTCAAGAAAAGAAGCTCTTCTGCATTTGTCTTCAATCACCACCTTCAAGGAGACTGTCCAAGTTTGAACTCCACCAAGCCTCTTATAGAGCTCATGGAGCCTCTTGCTGATGAGGAAACATCTCAAGAGCATGAGAAAAGAATCTCATACTTGCCTAAGTTTGTGAACATGTCTAATAGGAAGAGATTGGTGTACATTGACATTGGAGTTGGTGGGGTGCCTAACAATGTTACTAATTGGTTCTTTCCATCTTACCCCATTGATTTTAGAGATTTCAATGTATACTTTGTTCACTACAATACTTCCATCTTGTTGTCTCATGTGAAAAGGCCTGGCATAACCTTTGTTTATCATCCGGGGTTGTCCTCGTCCTCCAAGGGTGAAGAGTTTGACTTCCATGCATGGTTCAAAGAGACAGTGCAGCAGGCTGATTTTGTGGTGTTGAAGATGAATGCAGGGAATGTTGAAATGAAGTTTCTAAGGGATATGTTTGAAAGTGGAGCCATATGCTTTGTTAATGAATTGTTTCTCAGCTGCTCAGAAAACACGGAAGAAAAAGGTTGCATGGATATTTACAAGGGACTCAGAGATAGTGGTGTCTATGTTCATCAATGGTGGGAAGCAGATGAGTTGCATCAAGGGTCTAACAAGGTGGTTGATGTTCGGTAA 1353 0.4531 MLILYIHMDSSKAFFSHSSFKASIAKTLFFRALFLASAISLLSLLRFLPTLHFLSASLAPETHLQCLNQNTSGSYLFQSRVYNSFWDSFNCINHANFTTSAVNHLLRNHFLNRKATSLCVGQPSPMPAVSAMRQLGFTSVTAVSLSHNTLLSQLHYQDSSFDFVFTKDVDKVSVPALLLLEVERVLKPGGIGALLIRPNHAPSSSVSSMLRSSSVVDVTLVNGITLVVFKKRSSSAFVFNHHLQGDCPSLNSTKPLIELMEPLADEETSQEHEKRISYLPKFVNMSNRKRLVYIDIGVGGVPNNVTNWFFPSYPIDFRDFNVYFVHYNTSILLSHVKRPGITFVYHPGLSSSSKGEEFDFHAWFKETVQQADFVVLKMNAGNVEMKFLRDMFESGAICFVNELFLSCSENTEEKGCMDIYKGLRDSGVYVHQWWEADELHQGSNKVVDVR* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g3093 450 Pfam Methyltransferase domain 151 191 IPR013216 GO:0008168
Ahy12g3093 450 PANTHER PEPTIDE UPSTREAM PROTEIN 17 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g3093 Ahy-Chr12 120383909 120385950 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g3093 - - lja:Lj5g3v0626880.1 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g3093 12 120383909 120385950 Ahy2g2676 2 102785984 102788025 hybridization
Ahy16g1595 16 40783489 40785595 Ahy12g3093 12 120383909 120385950 PCT
Ahy6g1434 6 29593891 29596088 Ahy12g3093 12 120383909 120385950 PCT
Ahy12g3093 12 120383909 120385950 Ahy16g1595 16 40783489 40785595 PCT
Ahy12g3093 12 120383909 120385950 Ahy6g1434 6 29593891 29596088 PCT