Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1180 ATGGCCACCACTTCAATCTCAAACATGGTGGTTACCTTGGAAGCCAAGAATCCCCCTAAACTACAAGCAGCACCAGCAGCATCTTCATCATCTCACACCCTGGTCACCACCACAAGAAAACCCAGCATCATGACATGCAAAGCCGCCATAAGCACCCAACTCAAACCAGAGCGACCAATGCCCCCGAAACAAGAACAACTGGACATATCATCCGTATGGCGAAAGCTCCACGGGGAGGACAAGTGGGCCGGGCTTCTTGACCCGTTGGACCCTGGCTTGCGGCTTGAGATAATCCGGTACGGCGAAATGGCACAGGCCACGTATGATTCCTTCGACTACGACCCATACTCCAAGTATTGTGGAAGCTGCAGGTACCCACATGAGAAGCTGTTCGAGTACCTTGACATGACGCACATGGGCTACACCGTTTCACGCTACATCTACGCGACGGCCAACGTCAGCCTGCCCAGCTTCTTCAAGAGGTCCAGGTTCCCTCACAAGATGTGGAGCGACAGGGCCAACTGGGCCGGCTACATCGCCGTTTCCGACGACCAAACCAGCAAGAGCTTGGGGAGGAGGGACATAGCCATTGCGTGGAGGGGGACGGTCACGCACACCGAGTGGCTGGCGGATCTCACGAACTACCTCAGGCCTTTATCTCCGGAGATTCCTTGCGGCGATCAAGGGGTGAAGGTGGAGGCGGGCTTCATGGATCTTTACACTGATAAGTCCCCGCAGTGCCGTTTCTGCAAATACTCTGCCAGACACCAGGTCCTTTCGGAGGTGAGGAAGTTGGTTGAGAAGTACGAAGACGAGGAAGTGTCGATCACCATCACCGGCCACAGCTTGGGCAGCGCGTTGGCCGTACTGAGCGCCTTTGACTTGGCAGAAACTGGCTTAAACGTCAAGAAAGACGGCAGCGGCATCCACATCTCCGTGATCACGTTCGCCGGGCCGAGGGTGGGAAACTGGAGGTTCAAGCAGAGGCTGGAGTTGGATCACGGCGTGAAGGTGCTTCGGGTTGTGAACACTCACGACATTGTTCCGAAGTCGCCGGGATTCATCATCAACGAGAGCTCGCCGGAGTGGGTGTACAGACTGTTCAAGTGGTTGCCTTGGAGCTACGCTCACGTTGGGGTGCAGCTGGAGTTGAACCACCGGGACTCACCTGAGTTGAACCCTAATGGTGATGCTTCTTGTGCTCATAACTTGGAGGCTTATTTGCATCTCATTGATGGATACCAGGGGAGCAATCTTGGATTTAAGTCAGCGACTGAGAGGGACGTTGCATTGGTGAACAAGAGCTGTGATTTTGTGAAAGACGAACACTCAGTGCCACCGGTGTGGTGGCAGGACATGAACAAGGACCTGGTCAGGGGTTCAGATGGTCTCTGGAGGCAGCCAGAGCGCCCAAGACATGTCGACCACCCGGAAGATATTGATCACCATCTCAACCAACTAGGCCTCCTTCAATCCCAATCTTGA 1485 0.5468 MATTSISNMVVTLEAKNPPKLQAAPAASSSSHTLVTTTRKPSIMTCKAAISTQLKPERPMPPKQEQLDISSVWRKLHGEDKWAGLLDPLDPGLRLEIIRYGEMAQATYDSFDYDPYSKYCGSCRYPHEKLFEYLDMTHMGYTVSRYIYATANVSLPSFFKRSRFPHKMWSDRANWAGYIAVSDDQTSKSLGRRDIAIAWRGTVTHTEWLADLTNYLRPLSPEIPCGDQGVKVEAGFMDLYTDKSPQCRFCKYSARHQVLSEVRKLVEKYEDEEVSITITGHSLGSALAVLSAFDLAETGLNVKKDGSGIHISVITFAGPRVGNWRFKQRLELDHGVKVLRVVNTHDIVPKSPGFIINESSPEWVYRLFKWLPWSYAHVGVQLELNHRDSPELNPNGDASCAHNLEAYLHLIDGYQGSNLGFKSATERDVALVNKSCDFVKDEHSVPPVWWQDMNKDLVRGSDGLWRQPERPRHVDHPEDIDHHLNQLGLLQSQS* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1180 494 SUPERFAMILY alpha/beta-Hydrolases 155 412 IPR029058 -
Ahy6g1180 494 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 4 488 - -
Ahy6g1180 494 PANTHER PHOSPHOLIPASE A1 4 488 - -
Ahy6g1180 494 Pfam Lipase (class 3) 197 354 IPR002921 GO:0006629
Ahy6g1180 494 Gene3D alpha/beta hydrolase 72 480 IPR029058 -
Ahy6g1180 494 CDD Lipase_3 146 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1180 Ahy-Chr6 17343718 17346842 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1180 64 489 Acyl Lipid Metabolism Gene Families AT2G30550 56.481 2.69e-178 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1180 - - gmx:100815007 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0152 16 1571387 1573811 Ahy6g1180 6 17343718 17346842 hybridization
Ahy6g1180 6 17343718 17346842 Ahy12g0816 12 14895000 14903488 PCT
Ahy6g1180 6 17343718 17346842 Ahy2g0686 2 11353321 11360666 PCT
Ahy12g0816 12 14895000 14903488 Ahy6g1180 6 17343718 17346842 PCT
Ahy2g0686 2 11353321 11360666 Ahy6g1180 6 17343718 17346842 PCT