Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0816 ATGGCATCAGCAACTTCAATCTCATACACACTCATCGGTTTCCACAAAACTCACAAAGAATCTAACCCTAAATCAACAATAACCCAATACACAAAAACAAAACCCATCACTCTATCCATGACTTTCCAAGAAGCCAAAAAAACCGTTATGTCACCAACAGCCACAACCACCGCCGCAACCACAACCACAAGGCAACAAACTTTGGAACAAGAACAAGAAGCAATGCAACACATATATAGAAAAAAGCCCAAACACCCAAAAGAACACCACAGCAAGCGGAGACTCCGTCACGTGTGGCGTGAGATCCAAGGCGAGAGCGATTGGGCCGGGCTTTTGGATCCAATTGACCCAATTCTCCGCTTGGAACTCATACGCTACGGCGAGATGGCCCAGGCCTGCTACGACGCCTTTGACTTTGACCCGTTTTCCAAGTACTGCGGGAGTTGTAGGTTCACGCGCCGTAATTTCTTTTCATCCCTTGGGATGCCTCACCCGCGCCATGGTTACACGGTGACGCGGTATCTTTACGCCACCGCGAACATAAATCTGCCGAATTTTTTCCGGCAGTCGCGGTGGCCAAAGATGTGGAGCAAGAATGCGAATTGGGCGGGATACGTGGCGGTTTCGGACGATGAGATGAGTAAGAGGATAGGGCGGAGGGATGTGGCGGTGGCGTGGCGGGGGACGGTGACGCACTTGGAGTGGGTGGCGGATCTCATGGATTTTCTTAAGCCTTTCTCTTCTAATAGCATACCTTGCCTTGATCCATCTGTTAAGGTTGAATCAGGATTCTTAGACCTCTACAATGAAAAAGATGAGAATTGTGGTTACTGTAAATACTCAGCAAGAGAACAAATTCTTACAGAGATAAAAAGGCTCTTAGAAATGTACCCTAATGAGGAACTCAGCATCACCATAACTGGTCACAGTTTGGGTGCTGCCTTGGCCATTCTGAGTGCTTATGACATCGTCGAGACCGGCTTGAATGTCGTGGCCGACAGCCGTGTTGTGCCGGTCTCGGTGTTCTCGTTTTCCGGTCCCAGAGTCGGGAATGTGAGGTTTAAGGAGAGGCTAGAAAACTTAGGGCTAAAGGTATTGAGGGTGCTCAACGTTCATGATATGGTGCCGAAGTCGCCGGGATTGGTGTTCAACGAGCATCTGCCGGCGGCGGTGATGAAGTTGGCGGAGGGGTTGCCATGGAGTTACTCACATGTTGGGGTAGAGCTGGCTTTGGATCATAAGAACTCGCCATTCTTGAACCCAAATGGTGATGCTATTTGTGCACATAACTTGGAGGCTCTCTTGCATTTGATTGATGGGTACCATGGAAAGGGTGAAAGATTTGTGCTAGCAACTGGTAGGGACCCTGCTTTGGTGAACAAGGCATGTGATTTCTTGAAAGACCATTACTTGGTTCCACCAAATTGGAGGCAAAATGAGAATAAAGGCATGGTCTTGAGCCATGATGGTAGATGGGTTCAGCCTGAAAGACCCAAACTTGATGATCACCCTGAAGATATGCATCACCACCTCAAGCAATTAGGTCTAGCTACTTCATATGATATTTGA 1569 0.4825 MASATSISYTLIGFHKTHKESNPKSTITQYTKTKPITLSMTFQEAKKTVMSPTATTTAATTTTRQQTLEQEQEAMQHIYRKKPKHPKEHHSKRRLRHVWREIQGESDWAGLLDPIDPILRLELIRYGEMAQACYDAFDFDPFSKYCGSCRFTRRNFFSSLGMPHPRHGYTVTRYLYATANINLPNFFRQSRWPKMWSKNANWAGYVAVSDDEMSKRIGRRDVAVAWRGTVTHLEWVADLMDFLKPFSSNSIPCLDPSVKVESGFLDLYNEKDENCGYCKYSAREQILTEIKRLLEMYPNEELSITITGHSLGAALAILSAYDIVETGLNVVADSRVVPVSVFSFSGPRVGNVRFKERLENLGLKVLRVLNVHDMVPKSPGLVFNEHLPAAVMKLAEGLPWSYSHVGVELALDHKNSPFLNPNGDAICAHNLEALLHLIDGYHGKGERFVLATGRDPALVNKACDFLKDHYLVPPNWRQNENKGMVLSHDGRWVQPERPKLDDHPEDMHHHLKQLGLATSYDI* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0816 522 CDD Lipase_3 174 415 - -
Ahy12g0816 522 SUPERFAMILY alpha/beta-Hydrolases 186 441 IPR029058 -
Ahy12g0816 522 MobiDBLite consensus disorder prediction 49 69 - -
Ahy12g0816 522 PANTHER PHOSPHOLIPASE A1-IGAMMA2, CHLOROPLASTIC 33 512 - -
Ahy12g0816 522 Pfam Lipase (class 3) 224 381 IPR002921 GO:0006629
Ahy12g0816 522 Gene3D alpha/beta hydrolase 98 507 IPR029058 -
Ahy12g0816 522 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 33 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0816 Ahy-Chr12 14895000 14903488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0816 47 516 Acyl Lipid Metabolism Gene Families AT2G30550 63.617 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0816 - - gmx:100779676 738.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0816 12 14895000 14903488 Ahy2g0686 2 11353321 11360666 hybridization
Ahy16g0152 16 1571387 1573811 Ahy12g0816 12 14895000 14903488 PCT
Ahy6g1180 6 17343718 17346842 Ahy12g0816 12 14895000 14903488 PCT
Ahy12g0816 12 14895000 14903488 Ahy16g0152 16 1571387 1573811 PCT
Ahy12g0816 12 14895000 14903488 Ahy6g1180 6 17343718 17346842 PCT