Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1138 ATGTCACAATCAGCAAGAGAGCAGGAAGTGTCGCCATTAACTTCTGGAAGACTATCACACAGTAGTGAGCCTCTGAATGGTGGTGGTTCGTTAACCGGAACAGACAGCCCCCCAATTTCACCTTCTGATGAATTTGATGATGTTGTTAAGTTTTTCCGGGCAAACAATTCCATTCACCCCTTATTCAATGGTGGAAGAGCCAGTGCTGCAATTGCCAATGGCGCGGCACCCTCAGGGCCAAAGACAGTTGGAAGATGGTTGAAGGACAGGAGGGAGAAGAAGAAAGAAGAAACAAGAACTCACAATGCTCAGCTGCATGCTACCATCTCAGTGGCCGCAGTGGCTTCTGCCGTGGCAGCCATCGCGGCTGCAACGGCTGCTTCATCTGCACCAAGCAAGGATGAGAGAATGGCCAAGACGGACATGGCTGTGGCCTCTGCAGCCACATTGGTGGCCGCGCAGTGCGTTGAGGCTGCTGAGGCAATGGGGGCTGAGAGAGACCACCTAGCTTCTGTGGTTAGCTCAGCTGTCAATGTCCGCTCTCATGATGATATCACTACTCTTACCGCTGCAGCTGCAACAGCTCTAAGAGGAGCAGCTACCCTGAAGGCAAGAGCATTGAAAGAGGTATGGAACATTGCTGCAGTGACACCATTAGAGAAAGGCAGAGGAGGGATGGGAATTTCTGGCAAAGGTAATACAAATACCAATAACAATAACAGCAACAATACCAGCACAAGTGATAGTGGGGAGATTCTCAATGGAGAAAATTTTCTAGGCGTCTGCAGCCAAGAGCTACTTGCTAAGGGAACTGAATTGCTCAAACGAACCCGCAAAGGTGATCTTCACTGGAAAATAGTTTCTGTTTACATACATCGAACAGGCCAGGTGATGCTGAAAATGAAGAGCAGACATGTTGCAGGAACCATTACCAAAAAGAAAAAGAATGTTGTGCAAGATATTTGCACAGACTTACCAGCATGGCCAGGGAGACATCTGCTTGATGATGGTGAAAAGCGGAAATACTTTGGGTTGAAGACAGATGCAAGGGGGATTGTGGAGTTTGAGTGTAGAAATCAAAGGGAATATGATATCTGGACTCAAGGGGTCTCCAGGCTTCTTTCCATTGTTGCACAAAGACAGAACAGATTTGGAAACTGA 1161 0.478 MSQSAREQEVSPLTSGRLSHSSEPLNGGGSLTGTDSPPISPSDEFDDVVKFFRANNSIHPLFNGGRASAAIANGAAPSGPKTVGRWLKDRREKKKEETRTHNAQLHATISVAAVASAVAAIAAATAASSAPSKDERMAKTDMAVASAATLVAAQCVEAAEAMGAERDHLASVVSSAVNVRSHDDITTLTAAAATALRGAATLKARALKEVWNIAAVTPLEKGRGGMGISGKGNTNTNNNNSNNTSTSDSGEILNGENFLGVCSQELLAKGTELLKRTRKGDLHWKIVSVYIHRTGQVMLKMKSRHVAGTITKKKKNVVQDICTDLPAWPGRHLLDDGEKRKYFGLKTDARGIVEFECRNQREYDIWTQGVSRLLSIVAQRQNRFGN* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1138 386 Pfam Plant pleckstrin homology-like region 272 377 IPR013666 -
Ahy6g1138 386 PANTHER EXPRESSED PROTEIN 1 385 IPR040269 -
Ahy6g1138 386 MobiDBLite consensus disorder prediction 1 42 - -
Ahy6g1138 386 Pfam Auxin canalisation 2 222 IPR008546 -
Ahy6g1138 386 MobiDBLite consensus disorder prediction 229 251 - -
Ahy6g1138 386 MobiDBLite consensus disorder prediction 1 39 - -
Ahy6g1138 386 MobiDBLite consensus disorder prediction 224 251 - -
Ahy6g1138 386 PANTHER AUXIN CANALIZATION PROTEIN 1 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1138 Ahy-Chr6 16639710 16643481 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1138 - - aip:107645207 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0186 16 1948560 1954139 Ahy6g1138 6 16639710 16643481 hybridization
Ahy6g1138 6 16639710 16643481 Ahy12g0777 12 13735391 13742276 PCT
Ahy6g1138 6 16639710 16643481 Ahy2g0650 2 10327537 10334234 PCT
Ahy12g0777 12 13735391 13742276 Ahy6g1138 6 16639710 16643481 PCT
Ahy2g0650 2 10327537 10334234 Ahy6g1138 6 16639710 16643481 PCT