Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0777 ATGGAATCCAATTCAAGAATAATGAAAAATAATGAGTTGCATGGAAATGGCAGTAGTTCTTCCATGCCTGAGAGTCCTCTTCTTCCTCCTCCTCCTCCTCCTCAAGAACATGATGCTTCATCATCAACCATGTCTCCAGAGAATAATAATAATAATAATAATGAGTTCTCTTTTTCTTACTCTGCCACTTCACAACAGCTTCTCCTTGACTGCATTTTCTCACAGTCCACTAGACAGGAATTAGTGTCACCACCATTAACATCAGGAAGAGTCTCACTTGATCATGAAGCAGTGAATAATAATAATAATAATAACAATAATGGTGGTGGCTCCCAAACAGGAACAGATGATAGTCCACCAATTTCTCCTTCTCAGGATGAGTATGATGATGATCTTCTTAAGTTCTTTAGAGCCAACAATTCAATTCACCCTCTATTCAATGGTGGAAGAGCCATCATGAATTCTTCTTCTACCTGCATTAATGGCAATACAACTCCACCATGCTCATCATCATCATCATCAGGGCCTAAAACAGTTGGAAAATGGTTAAAGGAAAGAAGAGAGAAAAAGAAAGAAGAAAACAGAACACACAATGCTCAACTCCATGCATCCATATCTGTTGCCGCGGTAGCAGCCGCAGTTGCAGCTGTTACGGCCGCGACTGCGACCTTGTCCGCGAGCAACAGGGAGGATGAGAAGATGGGAAAGATAGACATGGCTGTGGCCTCAGCAGCAACATTGGTTGCTGCTCAGTGTGTTGAGGCTGCAGAATCAATGGGGGCTGAAAGGGAACATCTTGCTTCAGTGATTGGTTCTGCTGTTAATGTCAAATCTGATGATGATATCAATACTCTTACAGCTGCTGCTGCCACAGCTCTAAGAGGCGCAGCAACCTTGAAAGCAAGAGCATTGAAGGAGGTTTGGAATATCACCTCAGTGGCACCATTAGAGAGAGGCTTTGGGATTGGAATTTGTGGTGGTAAAGCAAGTTATAGTACTTCAAGCACAAGTGATAGTGGTGAGTTCATTAATGGAGAAAATTTTCTTGGTGTTTGCACCTTAGAGCTCCTTGCTAAGGGCACTGAATTGCTCAAACGAACTCGAAAAGGTGATCTTCACTGGAAAATAGTTTCTGTTTACATGCATAGAACAGGCCAGGTTATGTTGAAGATGAAGAGCAAACATGTTGCTGGAACCATTACCAAGAAGAAAAAGCATGTTGTGTTGGATGTGTGCACAAATTTAGCAGCATGGCCAGGGAGACATCTATTTGATGATGAAGAGAAAAGAAAGTACTTTGGATTGAAGACAGAATCAAGAGGGATTGTGGAGTTTGAATGCAGAAACCAAAGAGAATATGATATGTGGACTCAAGGTGTTTCTAGACTTCTATCCATTGTTGCAGAGAGACAAAACAAAAATGGGATTTGA 1431 0.4165 MESNSRIMKNNELHGNGSSSSMPESPLLPPPPPPQEHDASSSTMSPENNNNNNNEFSFSYSATSQQLLLDCIFSQSTRQELVSPPLTSGRVSLDHEAVNNNNNNNNNGGGSQTGTDDSPPISPSQDEYDDDLLKFFRANNSIHPLFNGGRAIMNSSSTCINGNTTPPCSSSSSSGPKTVGKWLKERREKKKEENRTHNAQLHASISVAAVAAAVAAVTAATATLSASNREDEKMGKIDMAVASAATLVAAQCVEAAESMGAEREHLASVIGSAVNVKSDDDINTLTAAAATALRGAATLKARALKEVWNITSVAPLERGFGIGICGGKASYSTSSTSDSGEFINGENFLGVCTLELLAKGTELLKRTRKGDLHWKIVSVYMHRTGQVMLKMKSKHVAGTITKKKKHVVLDVCTNLAAWPGRHLFDDEEKRKYFGLKTESRGIVEFECRNQREYDMWTQGVSRLLSIVAERQNKNGI* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0777 476 MobiDBLite consensus disorder prediction 1 57 - -
Ahy12g0777 476 MobiDBLite consensus disorder prediction 96 127 - -
Ahy12g0777 476 MobiDBLite consensus disorder prediction 96 122 - -
Ahy12g0777 476 Pfam Auxin canalisation 44 318 IPR008546 -
Ahy12g0777 476 PANTHER AUXIN CANALIZATION PROTEIN 39 474 - -
Ahy12g0777 476 Pfam Plant pleckstrin homology-like region 362 467 IPR013666 -
Ahy12g0777 476 MobiDBLite consensus disorder prediction 1 23 - -
Ahy12g0777 476 MobiDBLite consensus disorder prediction 38 57 - -
Ahy12g0777 476 PANTHER EXPRESSED PROTEIN 39 474 IPR040269 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0777 Ahy-Chr12 13735391 13742276 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0777 - - gmx:100805743 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0777 12 13735391 13742276 Ahy12g0777 12 13735391 13742276 ECH
Ahy12g0777 12 13735391 13742276 Ahy2g0650 2 10327537 10334234 hybridization
Ahy16g0186 16 1948560 1954139 Ahy12g0777 12 13735391 13742276 PCT
Ahy6g1138 6 16639710 16643481 Ahy12g0777 12 13735391 13742276 PCT
Ahy12g0777 12 13735391 13742276 Ahy16g0186 16 1948560 1954139 PCT
Ahy12g0777 12 13735391 13742276 Ahy6g1138 6 16639710 16643481 PCT