Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1033 ATGAAGCGAGTTTGGAGATTCACTTCAGACGCAGTAGCGCAAGCCGAACACTTCTGCTTCCACTCCCATGGCATCCCTAACCCTAAACCTAATATTCCGTCCTTTACTACCACCACTGCCGCATTCACATCGCCTGGCCTCACGCGCCGCCACTGCACCTCCGGTACCCCTCCTCCTCCTCACCCGCTTCAAGATATTACTCCCCTCTTCATCGAGAAACGCAGGCTTCCGTTCGGAGAGGATCTCATCAATAAAGCATCGGTTTTGAAGAACCAATTGGTTCTCGAAGCCTCGGATTCCAATCGGGTAATTGAGATCCTCGATGAGAACTCTGGATCACTGATTGAAAGTCATGTAGGTGGATCTGTGCTGCTCGAGCTCTTGAATCAGTTGGATTCGTGGCCTTCCTTGGCCCTTCAGGTGTTTGATTGGAGGAGGGAGAAGAAGAATTCTGGTGTTGACTCCCCAATGAGTGTATATGAGTATTCTAAGGGCATAAAAGCTGCAGGTAGATGTAAAGATGTTCATCATGCCGTTGAGATCTTTCGAGACGCTGTGAAGAAGGGCATGAGAACGACCAGCACTTACAATGCATTGATGAGTGCTTTTATGTTCAATGGTCTTGCAAAGATGTGTCACGAGTTGTTCTGTGATATGAAGAAGCATGCAGCTTGTCCTCCTTCAATTGCCACATACAATATTCTCATATCTCTTTACTCTCGCTTGGTGCTGGTGGATTACATGGAAGAAACATACCAGGCGATAAAAGAGTCGGACCTCCAACTCAGTGAGAATACTTATAATTATTTGATTGCTGGATATATCTCGGCTTCGATGTGGCATGACATGGAGAGAGTTTTTCAAATGATGAAGGGAGGCCCTGTCAAGCCTAACTTGAAAACCCACCTGCTAATGCTTCGAGGCTATGGACAATCAGGTAATCTGGAGAAGATGGAAGAGATGTATTCTCTAGTAAGGGATCATGTAAACAAAAAAGAAATTCCATTGATCAGGGCCATGATATGTGCGTATTGTAAAAGTTCAGATTCGGATAGAGTGAAGAAGGTAGAGGGATTGCTGAAGCTTATTCCACAAGAACATTACAGACCATGGTTGAACGCCTTGTTGATTAAGCTCTATTCCCAGGAGGACTGGTTAGAGGAAATGGAGATTACAATTAATGAGGCTTTTGAGTGCAGAACCCGGATAGCCTCAGCAAGTACTATGAGATGCATTACTGCAACTTATTATCGGTGTAATGCAATAGAAAGGCTAGAAAATTTTGTGAAACGTGCTGAATGTGGTGGGTGGAGAATCTGTCGGTCCTTGTATCATTATGGTGTTGTACATGTGCAGTCTTTGGGAGATGAAGGGTCCCCAACACATTGA 1389 0.45 MKRVWRFTSDAVAQAEHFCFHSHGIPNPKPNIPSFTTTTAAFTSPGLTRRHCTSGTPPPPHPLQDITPLFIEKRRLPFGEDLINKASVLKNQLVLEASDSNRVIEILDENSGSLIESHVGGSVLLELLNQLDSWPSLALQVFDWRREKKNSGVDSPMSVYEYSKGIKAAGRCKDVHHAVEIFRDAVKKGMRTTSTYNALMSAFMFNGLAKMCHELFCDMKKHAACPPSIATYNILISLYSRLVLVDYMEETYQAIKESDLQLSENTYNYLIAGYISASMWHDMERVFQMMKGGPVKPNLKTHLLMLRGYGQSGNLEKMEEMYSLVRDHVNKKEIPLIRAMICAYCKSSDSDRVKKVEGLLKLIPQEHYRPWLNALLIKLYSQEDWLEEMEITINEAFECRTRIASASTMRCITATYYRCNAIERLENFVKRAECGGWRICRSLYHYGVVHVQSLGDEGSPTH* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1033 462 Pfam Pentatricopeptide repeat domain 255 310 IPR002885 -
Ahy6g1033 462 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 263 297 IPR002885 -
Ahy6g1033 462 PANTHER EXPRESSED PROTEIN 1 448 IPR044179 GO:0003729
Ahy6g1033 462 Gene3D Tetratricopeptide repeat domain 134 457 IPR011990 GO:0005515
Ahy6g1033 462 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 192 226 IPR002885 -
Ahy6g1033 462 Pfam PPR repeat family 192 237 IPR002885 -
Ahy6g1033 462 PANTHER OS05G0407900 PROTEIN 1 448 - -
Ahy6g1033 462 TIGRFAM PPR: pentatricopeptide repeat domain 266 298 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1033 Ahy-Chr6 13745949 13748983 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1033 157 388 Miscellaneous Gene Families AT4G11690 22.358 2.10e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1033 - - gmx:100816768 502.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0291 16 6293429 6296496 Ahy6g1033 6 13745949 13748983 hybridization