Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1000 ATGCTGAAAGCTATTCAGATACGTGGGTGTGTTACCCTCCGTTGTTGGAGCCTCAAACAACCCCTTTCCTTCATTTCTATTTCATCTTCTTTCAATTCCAAACCCTTTTCCTCATTCTCCCCAATCCCATACCCTTCCATCGATTCTTCCACGCCCCGACCTCGCAGGCTTCGATTCACTCCCTTTCACGCTTCATCATCACCACCACCCCCACCACTACTTCATTCTGCTGGTGTTCGAAACATCAAGTTCTGCCAGTGGTGTGGTGGTCCAACAAAGCATGATATACCTGATGGAGAAGAAAAATTGAGAGCCATTTGTACACTTTGTGGGAAGATTGCTTATCAGAATCCAAAAATGGTAGTCGGTTGCCTCATCGATCATGATAACAAGGTCCTTCTTTGCAAGAGGAATATTCAACCATCTCATGGCCTTTGGACGCTTCCTGCTGGTTATTTGGAAATTGGAGAATCAGCTGTGGAAGGTGCTATAAGGGAAACGAGGGAAGAAGCAAATGCTGATGTGGAAGTTATTTCTCCGTTTGCTCAATTGGATATTCCTTTAATCGGACAAACTTATATGATATTCTTAGCAAAACTGAAGACACCCCACTTTTCACCGGGTCCAGAATCATCAGAATGCCAACTATTTCCGGTTGATGAAATACCTATCGATTCTCTATCCTTTTCATCAATGGTGGTTACCTTAAGTTTGTATGTTGAGGATGTTAAGGCTGGAAAACCTAAATTCCATTATGGCATCATCAACAAAAGGCCCGGTACGAGTCCTTCAGATATTCATGCCTATACATTGGACTATCATATGCACTTGTGA 834 0.4305 MLKAIQIRGCVTLRCWSLKQPLSFISISSSFNSKPFSSFSPIPYPSIDSSTPRPRRLRFTPFHASSSPPPPPLLHSAGVRNIKFCQWCGGPTKHDIPDGEEKLRAICTLCGKIAYQNPKMVVGCLIDHDNKVLLCKRNIQPSHGLWTLPAGYLEIGESAVEGAIRETREEANADVEVISPFAQLDIPLIGQTYMIFLAKLKTPHFSPGPESSECQLFPVDEIPIDSLSFSSMVVTLSLYVEDVKAGKPKFHYGIINKRPGTSPSDIHAYTLDYHMHL* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1000 277 ProSiteProfiles Nudix hydrolase domain profile. 117 240 IPR000086 -
Ahy6g1000 277 Pfam Nudix N-terminal 83 116 IPR029401 -
Ahy6g1000 277 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 117 268 - -
Ahy6g1000 277 PANTHER BNAA03G19740D PROTEIN 1 275 - -
Ahy6g1000 277 Pfam NUDIX domain 122 223 IPR000086 -
Ahy6g1000 277 ProSitePatterns Nudix box signature. 151 172 IPR020084 GO:0016787
Ahy6g1000 277 Gene3D - 80 116 - -
Ahy6g1000 277 PANTHER NUDIX HYDROLASE 23 1 275 - -
Ahy6g1000 277 SUPERFAMILY Nudix 83 241 IPR015797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1000 Ahy-Chr6 13154960 13157577 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1000 K18453 - gmx:100808417 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0332 16 6838254 6841258 Ahy6g1000 6 13154960 13157577 hybridization
Ahy6g1000 6 13154960 13157577 Ahy19g0991 19 15747808 15751964 PCT
Ahy19g0991 19 15747808 15751964 Ahy6g1000 6 13154960 13157577 PCT