Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0332 ATGCTGAAAGCTATTCAGATACGTGGGTGTGTTACCCTCCGTTGTTGGAGCCTCAAACAATCCCTTTCCTTCATTTCTATTTCATCTTCTTTCAATTCCAAACCCTTTTCCTCATTCTCCCCAATCCCATACCCTTCCATCGATTCTTCCACGCCCCGACCTCGCAGGCTTCGATTCACTCCCTTTCACGCTTCATCATCACCACCACCCCCACCACTACTTCATTCTGCTGTAGTCGGTTGCCTCATCGATCATGATAACAAGGTCCTTCTTTGCAAGAGGAATATTCAACCATCTCATGGCCTTTGGACGCTTCCTGCTGGTTATTTGGAAATTGGAGAATCAGCTGTGGAAGGTGCTATAAGGGAAACGAGGGAAGAAGCAAACGCTGATGTGGAAGTTATTTCTCCGTTTGCTCAATTGGATATTCCTTTAATCGGTCAAACTTATATGATATTCTTAGCAAAACTGAAGACACCCCACTTTTCACCGGGTCCAGAATCATCAGAATGCCAACTATTTCCGGTTGATGAAATACCTATCAATTCTCTATCCTTTTCATCAATGGTGGTTACCTTAAGTTTGTATGTTGAGGATGTTAAGGCTGGAAAACCTAAATTCCATTATGGCATCATCAACAAAAGGCCCGGTACGAGTCCTTCAGATATTCATGCCTATACATTGGATCATCATATGCACTTGTGA 705 0.4326 MLKAIQIRGCVTLRCWSLKQSLSFISISSSFNSKPFSSFSPIPYPSIDSSTPRPRRLRFTPFHASSSPPPPPLLHSAVVGCLIDHDNKVLLCKRNIQPSHGLWTLPAGYLEIGESAVEGAIRETREEANADVEVISPFAQLDIPLIGQTYMIFLAKLKTPHFSPGPESSECQLFPVDEIPINSLSFSSMVVTLSLYVEDVKAGKPKFHYGIINKRPGTSPSDIHAYTLDHHMHL* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0332 234 PANTHER NUDIX HYDROLASE 23 77 232 - -
Ahy16g0332 234 ProSitePatterns Nudix box signature. 108 129 IPR020084 GO:0016787
Ahy16g0332 234 PANTHER BNAA03G19740D PROTEIN 77 232 - -
Ahy16g0332 234 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 76 225 - -
Ahy16g0332 234 SUPERFAMILY Nudix 61 198 IPR015797 -
Ahy16g0332 234 Pfam NUDIX domain 74 179 IPR000086 -
Ahy16g0332 234 ProSiteProfiles Nudix hydrolase domain profile. 73 197 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0332 Ahy-Chr16 6838254 6841258 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0332 K18453 - gmx:100808417 297.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0332 16 6838254 6841258 Ahy16g0332 16 6838254 6841258 ECH
Ahy16g0332 16 6838254 6841258 Ahy6g1000 6 13154960 13157577 hybridization
Ahy16g0332 16 6838254 6841258 Ahy19g0991 19 15747808 15751964 PCT
Ahy19g0991 19 15747808 15751964 Ahy16g0332 16 6838254 6841258 PCT