Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0892 ATGGATTCTGTCCTTGGTAATTGGCCATCTTATGATCCTCACAACTTTAGCCAGCTTCGAACTTCAGATCCTTCTAGATCTTCTAAAATGGCACCGGCCACTTACCATTCTATTCACAACAGGGACGTACCACCAGCCGATCAAGTGATAAATACCGAACACAAAAATATCCTTCTAAGAGAAATCTACCGGCGTGCAGAGGAGAAGATTGATCTAATAGCCTTACCATCACCATCGCAGTTGACACCCAAAAGAGCTGCATCCGATAACCTCATACCGGAGCATGGATCCAAACAACCAAGGGTTTCAACGTGA 315 0.4476 MDSVLGNWPSYDPHNFSQLRTSDPSRSSKMAPATYHSIHNRDVPPADQVINTEHKNILLREIYRRAEEKIDLIALPSPSQLTPKRAASDNLIPEHGSKQPRVST* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0892 104 Pfam Det1 complexing ubiquitin ligase 4 68 IPR018276 -
Ahy6g0892 104 MobiDBLite consensus disorder prediction 75 104 - -
Ahy6g0892 104 MobiDBLite consensus disorder prediction 10 34 - -
Ahy6g0892 104 PANTHER DET1- AND DDB1-ASSOCIATED PROTEIN 1 1 104 IPR033575 GO:0032434
Ahy6g0892 104 PANTHER DET1- AND DDB1-ASSOCIATED PROTEIN 1 1 104 - -
Ahy6g0892 104 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0892 Ahy-Chr6 11396173 11399077 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0892 K11792 - rcu:8287436 135.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0438 16 8284554 8287505 Ahy6g0892 6 11396173 11399077 hybridization