Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy16g0438 | ATGGATTCTGTCCTTGGTAATTGGCCATCTTATGATCCTCACAACTTTAGCCAGCTTCGAACTTCAGATCCTTCTAGATCTTCTAAAATGGCACCGGCCACTTACCATTCTATTCACAACAGGGACGTACCACCAGCCGATCAAGTGATAAATACCGAACACAAAAATATCCTTCTAAGAGAAATCTACCGGCGTGCAGAGGAGAAGTTGACACCCAAAAGAGCCGCATCCGATAACCTCATACCGGAGCATGGATCCAAACAACCAAGGGTTTCAACTTGA | 282 | 0.4504 | MDSVLGNWPSYDPHNFSQLRTSDPSRSSKMAPATYHSIHNRDVPPADQVINTEHKNILLREIYRRAEEKLTPKRAASDNLIPEHGSKQPRVST* | 94 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy16g0438 | 93 | MobiDBLite | consensus disorder prediction | 69 | 93 | - | - | |
| Ahy16g0438 | 93 | PANTHER | DET1- AND DDB1-ASSOCIATED PROTEIN 1 | 1 | 93 | - | - | |
| Ahy16g0438 | 93 | MobiDBLite | consensus disorder prediction | 10 | 34 | - | - | |
| Ahy16g0438 | 93 | MobiDBLite | consensus disorder prediction | 1 | 49 | - | - | |
| Ahy16g0438 | 93 | Pfam | Det1 complexing ubiquitin ligase | 4 | 68 | IPR018276 | - | |
| Ahy16g0438 | 93 | PANTHER | DET1- AND DDB1-ASSOCIATED PROTEIN 1 | 1 | 93 | IPR033575 | GO:0032434 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy16g0438 | Ahy-Chr16 | 8284554 | 8287505 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ahy16g0438 | K11792 | - | rcu:8287436 | 144.05 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Ahy16g0438 | 16 | 8284554 | 8287505 | Ahy6g0892 | 6 | 11396173 | 11399077 | hybridization |