Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0836 ATGGATACTTTGCTCAAAACACCTAACAAGCTTGAATTCTTGCACCCACTACACGGTTATTCTGAAAAGCTCGGAACTTTAGCCCCTTCTAAGTTGCAATTTGGATTTGGTTCTAAGAAGCAGCCACTTGTGAAGTGGGGTAAGTGCGGTGGTGGTGGTGGTGGTTTGAGGGCTAGTAGCAGTGCCCTTCTTGAACTTGTTCCTGAGATCAAGAAAGAGAATCTTGATTTTGAGCTTCCCTTGTATGATTCCTCAAAGGGTGCTGTGGTGGACCTTGCTGTTGTGGGAGGAGGACCGGCAGGGCTCGCCGTGGCGCAGCAGGTTTCTGAGGCAGGGCTCTCTGTTTGTGCCATTGACCCTAACCCTAGGTTGATTTGGCCCAACAATTACGGCGTTTGGGTCGATGAATTCGAGGCCATGGACTTGCTTGATTGCCTTGACACCACTTGGTCTGGTGCTGTTGTCTACATTGATGACAACAAGAAGAAGGATCTTGATAGGCCTTATGGCAGGGTCAATAGGAAGCAATTGAAGTCAAAGATGATGCAGAAATGCATATCAAATGGTGTTAAGTTCCACCAAGCTAAAGTCATCAAGGTTATTCATGAGGATGCCAAATCTTTGTTGATTTGTAATGATGGTGTCACGGTTCAGGCTACCGTGATTCTTGATGCAACTGGCTTTTCCAGATGCCTTGTTCAGTATGATAAACCTTATAATCCCGGTTACCAGGTTGCTTATGGAATCTTGGCTGAGGTTGATGAACATCCATTTGATGTGGATAAAATGCTTTTCATGGATTGGAGAGATTCCCATCTGGATGGGGACATGGTGCTGAAGGAAAGGAATAGCAGAATTCCCACCTTCCTATATGCCATGCCCTTTTCATCCAATCGGATATTTCTTGAAGAAACCTCTCTTGTTGCGCGGCCAGGGTTACGTATGGATGATATACAGGAAAGAATGGTTGCAAGGTTGAAACACTTGGGAATTAGAGTGAAGAGCATTGAAGAAGATGAGCACTGTGTCATTCCCATGGGTGGTCCCCTCCCAGTTCTCCCCCAAAGAGTTGTTGGAATCGGCGGGACTGCAGGGATGGTGCATCCTTCAACTGGGTATATGGTAGCAAGGACTCTCGCCGCAGCTCCCATTGTTGCTAATGCCATTGTGCAAAGTCTTGGTTCCGACAGAGGTCTTTTGGGAGCCGATATATCCTCCCGAGTGTGGAAAGATTTATGGCCGATCCAGAGGCGGCGGCAGAGGGAGTTCTTCTGCTTTGGTATGGACATCTTGCTCAAGCTTGATTTACCAGGAACAAGGAGATTTTTCGATGCATTTTTCGATCTAGAACCTCGTTACTGGCATGGATTCTTGTCATCGAGATTGTTTCTCCCTGAACTCTTTTTTTTTGGGCTCTCTCTATTTTCCTATGCTTCCAATACATCTAGATTAGAGATTATGGCAAAGGGGACTCTTCCTTTGGCAAACATGATCAACAACTTGTTAAAAGATACAGAATAA 1521 0.4576 MDTLLKTPNKLEFLHPLHGYSEKLGTLAPSKLQFGFGSKKQPLVKWGKCGGGGGGLRASSSALLELVPEIKKENLDFELPLYDSSKGAVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPNPRLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYIDDNKKKDLDRPYGRVNRKQLKSKMMQKCISNGVKFHQAKVIKVIHEDAKSLLICNDGVTVQATVILDATGFSRCLVQYDKPYNPGYQVAYGILAEVDEHPFDVDKMLFMDWRDSHLDGDMVLKERNSRIPTFLYAMPFSSNRIFLEETSLVARPGLRMDDIQERMVARLKHLGIRVKSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVQSLGSDRGLLGADISSRVWKDLWPIQRRRQREFFCFGMDILLKLDLPGTRRFFDAFFDLEPRYWHGFLSSRLFLPELFFFGLSLFSYASNTSRLEIMAKGTLPLANMINNLLKDTE* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0836 506 PANTHER UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIAL 6 506 - -
Ahy6g0836 506 SUPERFAMILY FAD/NAD(P)-binding domain 90 473 IPR036188 -
Ahy6g0836 506 Gene3D - 88 430 IPR036188 -
Ahy6g0836 506 PANTHER LYCOPENE BETA CYCLASE, CHLOROPLASTIC 6 506 - -
Ahy6g0836 506 Pfam Lycopene cyclase protein 91 483 - -
Ahy6g0836 506 TIGRFAM carotene-cycl: lycopene cyclase family protein 91 486 IPR010108 GO:0016117|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0836 Ahy-Chr6 10533052 10535008 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0836 K06443 - gmx:100783830 900.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0497 16 9129888 9131940 Ahy6g0836 6 10533052 10535008 hybridization