Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0497 ATGGATACTTTGCTCAAAACACCTAACAAGCTTGAATTCTTGCACCCACTACACGGTTATTCTGAAAAGCTGGGAACTTTAGCCCCTTCTAAGTTGCAAAGCCATGACCTTAGATTTGGATTTGGTTCTAAGAAGCAGCCACTTGTGAAGTGGGGTAAGTGCGGTGGTGGTGGTTTGAGGGCTAGTAGCAGTGCCCTTCTTGAACTTGTTCCTGAGATCAAGAAAGAGAATCTTGATTTTGAGCTTCCTTTGTATGATTCCTCAAAGGGTGCTGTGGTGGACCTTGCTGTTGTGGGAGGAGGACCGGCAGGGCTCGCCGTGGCGCAGCAGGTTTCTGAGGCAGGGCTCTCTGTTTGTGCCATTGACCCTAACCCTAGGTTGATTTGGCCCAACAATTACGGCGTTTGGGTCGATGAATTCGAGGCCATGGACTTGCTTGATTGCCTTGACACCACTTGGTCTGGTGCTGTTGTCTACATTGATGACAACAAGAAGAAGGATCTTGATAGGCCTTATGGCAGGGTCAATAGGAAGCAGTTGAAGTCAAAGATGATGCAGAAATGCATATCAAATGGTGTTAAGTTCCACCAAGCTAAAGTCATCAAGGTTATTCATGAGGATGCCAAATCTTTGTTGATTTGTAATGATGGTGTCACGGTTCAGGCTACCGTGGTTCTTGATGCAACTGGCTTTTCCAGATGCCTTGTTCAGTATGATAAACCTTATAATCCCGGTTACCAGGTTGCTTATGGAATCTTGGCTGAGGTTGATGAACATCCATTTGATGTGGATAAAATGCTTTTCATGGATTGGAGAGATTCGCATCTGGATGGGGACATGGTGCTGAAGGAAAGGAATAGCAGAATTCCCACCTTCCTATATGCCATGCCCTTTTCATCCAATCGGATATTTCTTGAAGAAACCTCTCTTGTTGCGCGGCCAGGGTTACGTATGGATGATATACAGGAAAGAATGGTTGCAAGGTTGAAACACTTGGGAATTAGAGTGAAGAGCATTGAAGAAGATGAGCACTGTGTCATTCCCATGGGTGGTCCCCTCCCAGTTCTCCCCCAAAGAGTTGTTGGAATCGGCGGGACTGCAGGGATGGTGCATCCTTCAACTGGGTATATGGTAGCAAGGACTCTCGCCGCAGCTCCCATTGTTGCTAATGCCATTGTGCAAAGTCTTGGTTCCGACAGAGGTCTTCTGGGAGCCGATATATCCTCCCAAGTGTGGAAAGATTTATGGCCAATCCAGAGGCGACGGCAGAGGGAGTTCTTCTGCTTTGGTATGGACATCTTGCTCAAGCTTGATTTACCAGGAACAAGGAGATTTTTCGATGCATTTTTCGATCTAGAACCTCGTTACTGGCATGGATTCTTGTCATCGAGATTGTTTCTCCCTGAACTCTTTTTTTTTGGGCTCTCTCTATTTTCCTATGCTTCCAATACATCTAGATTAGAGATTATGGCAAAGGGGACTCTTCCTTTGGCAAACATGATCAACAACTTGTTAAAAGATACAGAATAA 1530 0.4562 MDTLLKTPNKLEFLHPLHGYSEKLGTLAPSKLQSHDLRFGFGSKKQPLVKWGKCGGGGLRASSSALLELVPEIKKENLDFELPLYDSSKGAVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPNPRLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYIDDNKKKDLDRPYGRVNRKQLKSKMMQKCISNGVKFHQAKVIKVIHEDAKSLLICNDGVTVQATVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVDEHPFDVDKMLFMDWRDSHLDGDMVLKERNSRIPTFLYAMPFSSNRIFLEETSLVARPGLRMDDIQERMVARLKHLGIRVKSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVQSLGSDRGLLGADISSQVWKDLWPIQRRRQREFFCFGMDILLKLDLPGTRRFFDAFFDLEPRYWHGFLSSRLFLPELFFFGLSLFSYASNTSRLEIMAKGTLPLANMINNLLKDTE* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0497 509 PANTHER UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIAL 6 509 - -
Ahy16g0497 509 Gene3D - 91 433 IPR036188 -
Ahy16g0497 509 SUPERFAMILY FAD/NAD(P)-binding domain 93 476 IPR036188 -
Ahy16g0497 509 TIGRFAM carotene-cycl: lycopene cyclase family protein 94 489 IPR010108 GO:0016117|GO:0016705
Ahy16g0497 509 PANTHER LYCOPENE BETA CYCLASE, CHLOROPLASTIC 6 509 - -
Ahy16g0497 509 Pfam Lycopene cyclase protein 94 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0497 Ahy-Chr16 9129888 9131940 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0497 K06443 - gmx:100783830 902.894
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0497 16 9129888 9131940 Ahy6g0836 6 10533052 10535008 hybridization