Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0823 ATGGCGCTTCTTCTCTTTGTTCTGCGCCCAGCTCCTCCTCCTCCTCCTCGTACTCTTCGTTTCTTCATGGCTTCCTCTCGCTTATTCTCCGCATCTTCTCCTCACTTCCATCCACTTCCCCATTCTTCTGCTACTCTCTCTTCGTCTTTCTCTCTTTCCACCCCTCACTCTTCACTCTTCAAACCCAGGGTGAGTTTGCAGCTGGGAAAGTTGCCTAGTTTCCGTTTGGTGCAAAATGGTGTCACACCAAGGGCGTATATGTCTTCACTCTCAGCAGCTGAAACTTCTCAGAAGAGCGAAAGTTCAAAAGCTTATGGTTCTGATCAAATTCAGGTACTTGAAGGCTTGGATCCTGTTAGGAAAAGACCTGGAATGTATATTGGAAGCACTGGCCCACGTGGGTTGCACCATTTGGTTTATGAAATTTTGGATAATGCTGTTGACGAGGCTCAAGCTGGATTTGCTTCCAAGATTGATGTTGTTTTACAATCGGATGGTTCTGTAAGCATAACTGACGATGGTCGTGGGATTCCTACCGACTTACATCCAGTTACAAAAAAATCGGCTTTGGAGACAGTGTTGACGGTCTTGCATGCTGGTGGAAAATTTGGCGGGGCCAACAGTGGGTACTCTGTTTCAGGAGGTTTACATGGTGTTGGTTTATCGGTTGTCAATGCCTTGTCTGAGGCGTTAGAGGTAACAGTTTGGCGTGATGGATTAGAATACAAGCAAAAGTATTCTCGTGGAAAGCCAATAACAACTCTGACATGCCTTGTGCTTTCAGATGAAAAGAAAGATCGTCAGGGAACATCTATAAGATTTTGGCCTGACAAAGAAGTATTCACCACTGCTATTCAGTTTGACTACAACACAATAGCTGGGCGCATTAGGGAGTTGGCCTTCCTCAACCCAAAGCTTACTATCACACTTCAGAAAGAAGATGATGATCCAGAAAAGATCCAATATAATGAATATTTCTTTGCTGGAGGTTTGGTTGAATATGTGAAATGGCTTAACACTGATAAGAAAGCTCTTCACGATGTTCTGAGTTTTAGCAAACAAACAGATGGAATCAGTATTGATATAGCTTTTCAATGGTGTGAAGATGCATATTCAGACACTATATTGGGATATGCAAATAGTATACGCACTATTGATGGTGGCACCCATATCGATGGTATGAAGGCTTCTTTAACTAGAACACTTAATAGTCTTGGAAAGAAATCAAAAGTTATCAAGGATAAGGACATTACTTTAAGTGGTGAGCATGTGAGAGAGGGTCTAACATGTGTTGTCTCAGTGAAGGTCCCAAATCCAGAGTTTGAAGGACAAACGAAGACAAGATTGGGAAATCCTGAGGTGCGGAAAGTGGTTGATCAAGCTATGCAAGAGTATCTCTCGGAGCATTTGGAGTTGCATCCAGATGTTCTTGATTCCATACTTTCTAAAGCTGTTAATGCTTTCAAGGCAGCTCTTGCAGCAAAAAGAGCTAGAGAATTGGTGAGACAGAAGAGTGTATTAAGATCTTCATCTCTTCCTGGAAAGCTTGCTGATTGTTCATCCACAAATCCTGAAGAATGTGAAATATTCATAGTTGAAGGTGATTCAGCTGGAGGAAGTGCTAAGCAAGGGCGTGACAGGCGATTCCAGGCCATTCTACCTCTAAGAGGTAAGATTCTGAATATTGAAAGGAGGGATGAAGCTGCAATGTACAAAAATGAAGAGATCCAAAATCTAATTCTCGGTCTTGGCCTTGGAGTGAAGGGAGAAGATTTCAAGATGGAAGCACTGCGATATCATAAGATCATTATATTGACTGATGCTGATGTAGATGGTGCTCACATTCGAACGCTACTACTAACATTTTTCTTTAGATATCAGAGAGCTTTGTTTGATGAAGGGTGTATATATGTTGGTGTCCCACCACTGTATAAGGTTGTAAGGGGAAAACAAGTAAACTACTGCTATGATGATGCAGACCTTAAAAAACTTCGAAAAACATTTCCTCCAAATGCATCATACACCATTCAAAGGTTCAAAGGGCTGGGAGAGATGATGCCTTTGCAATTATGGGAGACAACCATGGATCCAGAACGCAGGCTATTGAAGCGATTAACGGTTGAGGACGCAGCTGAAGCGAACATTGTTTTTTCATCTCTTATGGGTACTCGGGTGGATGTTCGGAAGGATCTGATAAGAAATTCCGCAAACACGATTGATCTTGATCAGCTAGATATTTGA 2241 0.4221 MALLLFVLRPAPPPPPRTLRFFMASSRLFSASSPHFHPLPHSSATLSSSFSLSTPHSSLFKPRVSLQLGKLPSFRLVQNGVTPRAYMSSLSAAETSQKSESSKAYGSDQIQVLEGLDPVRKRPGMYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKIDVVLQSDGSVSITDDGRGIPTDLHPVTKKSALETVLTVLHAGGKFGGANSGYSVSGGLHGVGLSVVNALSEALEVTVWRDGLEYKQKYSRGKPITTLTCLVLSDEKKDRQGTSIRFWPDKEVFTTAIQFDYNTIAGRIRELAFLNPKLTITLQKEDDDPEKIQYNEYFFAGGLVEYVKWLNTDKKALHDVLSFSKQTDGISIDIAFQWCEDAYSDTILGYANSIRTIDGGTHIDGMKASLTRTLNSLGKKSKVIKDKDITLSGEHVREGLTCVVSVKVPNPEFEGQTKTRLGNPEVRKVVDQAMQEYLSEHLELHPDVLDSILSKAVNAFKAALAAKRARELVRQKSVLRSSSLPGKLADCSSTNPEECEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKMEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQRALFDEGCIYVGVPPLYKVVRGKQVNYCYDDADLKKLRKTFPPNASYTIQRFKGLGEMMPLQLWETTMDPERRLLKRLTVEDAAEANIVFSSLMGTRVDVRKDLIRNSANTIDLDQLDI* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0823 746 CDD TopoII_Trans_DNA_gyrase 329 486 - -
Ahy6g0823 746 CDD TOPRIM_TopoIIA_GyrB 527 641 IPR034160 -
Ahy6g0823 746 SMART topII5 134 737 IPR001241 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Ahy6g0823 746 TIGRFAM gyrB: DNA gyrase, B subunit 105 745 IPR011557 GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265
Ahy6g0823 746 Pfam DNA gyrase B 330 499 IPR013506 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Ahy6g0823 746 Pfam Toprim domain 528 629 IPR006171 -
Ahy6g0823 746 Gene3D - 508 746 IPR013759 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Ahy6g0823 746 ProSiteProfiles Toprim domain profile. 527 634 IPR006171 -
Ahy6g0823 746 PRINTS DNA topoisomerase II family signature 134 149 - -
Ahy6g0823 746 PRINTS DNA topoisomerase II family signature 596 612 - -
Ahy6g0823 746 PRINTS DNA topoisomerase II family signature 169 182 - -
Ahy6g0823 746 PRINTS DNA topoisomerase II family signature 377 390 - -
Ahy6g0823 746 PRINTS DNA topoisomerase II family signature 634 646 - -
Ahy6g0823 746 PRINTS DNA topoisomerase II family signature 214 228 - -
Ahy6g0823 746 PRINTS DNA topoisomerase II family signature 529 543 - -
Ahy6g0823 746 PRINTS DNA topoisomerase II family signature 614 631 - -
Ahy6g0823 746 PRINTS DNA topoisomerase II family signature 676 692 - -
Ahy6g0823 746 SUPERFAMILY Type II DNA topoisomerase 504 742 IPR013760 GO:0003918|GO:0005524
Ahy6g0823 746 SUPERFAMILY Ribosomal protein S5 domain 2-like 330 500 IPR020568 -
Ahy6g0823 746 Pfam DNA gyrase B subunit, carboxyl terminus 672 732 IPR002288 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Ahy6g0823 746 ProSitePatterns DNA topoisomerase II signature. 531 539 IPR018522 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Ahy6g0823 746 Gene3D - 328 507 IPR014721 -
Ahy6g0823 746 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 132 279 IPR003594 -
Ahy6g0823 746 PANTHER DNA GYRASE SUBUNIT B 46 746 - -
Ahy6g0823 746 PRINTS DNA gyrase subunit B signature 579 588 IPR000565 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Ahy6g0823 746 PRINTS DNA gyrase subunit B signature 713 729 IPR000565 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Ahy6g0823 746 PRINTS DNA gyrase subunit B signature 483 503 IPR000565 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Ahy6g0823 746 PRINTS DNA gyrase subunit B signature 301 314 IPR000565 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Ahy6g0823 746 PRINTS DNA gyrase subunit B signature 469 483 IPR000565 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Ahy6g0823 746 PRINTS DNA gyrase subunit B signature 421 437 IPR000565 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Ahy6g0823 746 PRINTS DNA gyrase subunit B signature 105 115 IPR000565 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Ahy6g0823 746 PRINTS DNA gyrase subunit B signature 329 351 IPR000565 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Ahy6g0823 746 PRINTS DNA gyrase subunit B signature 697 709 IPR000565 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Ahy6g0823 746 PRINTS DNA gyrase subunit B signature 286 301 IPR000565 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Ahy6g0823 746 Gene3D - 101 327 IPR036890 -
Ahy6g0823 746 PANTHER DNA GYRASE/TOPOISOMERASE SUBUNIT B 46 746 - -
Ahy6g0823 746 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 105 319 IPR036890 -
Ahy6g0823 746 CDD HATPase_GyrB-like 135 319 - -
Ahy6g0823 746 SMART HKATPase_4 130 280 IPR003594 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0823 Ahy-Chr6 10286201 10294298 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0823 K02470 - gmx:100807172 1187.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0510 16 9392793 9400912 Ahy6g0823 6 10286201 10294298 hybridization