Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0510 ATGGCGCTTCTTCTCTTTGTTCTACGCCCACCTCCTCCTCCTCCTCCTCGTACTCTTCGCTTCTTCATGGCTTCCTCTCGCTTATTCTCCGCAACTTCTTCTCACTCCTTCTTCCACTTCCATCCACTTCCCCATTCTTCTGCTACTCTCTCTTCATCTTTCTCTCTTTCCACCTCTCCCTCTTCACTCTTCAAACCCAGGGTGAGTTTGCAGCTGGGAAAGTTGCCTAGTTTCCGTTTGGTGCAAAATGGTGTCACACCAAGGGCGTATATGTCGTCACTCTCAGCAGCTGAAACTTCTCAGAGGAGTGAAAGTTCAAAAGCTTATGGTTCTGATCAAATTCAGGTACTTGAAGGCTTGGATCCTGTTAGGAAAAGACCTGGAATGTATATTGGAAGCACTGGCCCACGTGGGTTGCACCATTTGGTTTATGAAATTTTGGATAATGCTGTTGACGAGGCACAAGCTGGATTTGCTTCCAAGATTGATGTTGTTTTACAATCGGATGGTTCTGTAAGCATAACTGACGATGGTCGTGGGATTCCTACCGACTTGCATCCAGTTACAAAAAAATCGGCTTTGGAGACAGTGTTGACGGTCTTGCATGCTGGTGGAAAATTTGGCGGGGCCAACAGTGGGTACTCTGTTTCAGGAGGTTTACATGGTGTTGGTTTATCCGTTGTCAATGCCTTGTCTGAGGTGTTAGAGGTAACAGTTTGGCGTGATGGATTAGAATTCAAGCAAAAGTATTCTCGTGGAAAGCCAATAACAACTCTGACATGCCTTGTGCTTTCAAATGAAAAGAAAGATCGTCAGGGAACATCTATAAGATTTTGGCCTGACAAAGAAGTATTCACCACTGCTATTCAGTTTGACTACAACACAATAGCTGGGCGCATTAGGGAGTTGGCCTTCCTCAACCCAAAGCTTACTATCACACTTCAGAAAGAAGATGATGATCCAGAAAAGATCCAATATAATGAATATTTCTTTGCTGGAGGTTTGGTTGAATATGTGAAATGGCTTAACACTGATAAGAAAGCTCTTCACGATGTTCTGAGTTTTAGCAAAGAAACAGATGGAATCAGTATTGATATAGCTTTTCAATGGTGTGAAGATGCATATTCAGACACTATATTGGGATATGCAAATAGTATACGCACTATTGATGGTGGCACCCATATCGATGGTATGAAGGCTTCTTTAACTAGAACACTTAATAGTCTTGGAAAGAAATCAAAAGTTATCAAGGATAAGGACATTACTTTAAGTGGTGAGCATGTGAGAGAGGGTCTAACATGTGTTGTCTCAGTGAAGGTCCCAAATCCAGAGTTTGAAGGACAAACGAAGACAAGATTGGGAAATCCTGAGGTGCGGAAAGTGGTTGATCAAGCTTTGCAAGAGTATCTCTCGGAGTATTTGGAGTTGCATCCAGATGTTCTTGATTCCATACTTTCTAAAGCTGTTAATGCTTTCAAGGCGGCTTTAGCAGCAAAAAGAGCTAGGGAATTGGTGAGACAGAAGAGTGTATTAAGATCTTCATCTCTTCCTGGAAAGCTTGCTGATTGTTCATCCACAAATCCTGAAGAATGTGAAATATTCATAGTTGAAGGTGATTCAGCTGGAGGAAGTGCTAAGCAAGGGCGTGACAGGCGATTCCAGGCCATTCTACCTCTAAGAGGTAAGATTCTGAATATTGAAAGGAGGGATGAAGCTGCAATGTACAAAAATGAAGAGATCCAAAATCTAATTCTCGGTCTTGGCCTTGGAGTGAAGGGAGAAGATTTCAAGATGGAAGCACTCCGATATCATAAGATCATTATTTTGACTGATGCTGATGTAGATGGTGCTCACATTCGAACTCTACTACTAACATTTTTCTTTAGATATCAGAGAGCTTTGTTTGATGAAGGGTGTATATATGTTGGTGTCCCACCACTGTATAAGGTTGTAAGGGGAAAACAAGTAAACTACTGCTATGATGATGCAGACCTTAAAAAACTTCGAAAAACATTTCCTCCAAATGCATCATACACCATTCAAAGGTTCAAAGGGCTGGGAGAGATGATGCCTTTGCAATTATGGGAGACAACCATGGATCCAGAACGCAGGCTATTGAAGCGATTAACGGTTGAGGACGCAGCTGAAGCGAACATTGTTTTTTCATCTCTTATGGGCACTCGGGTGGATGTTCGGAAGGATCTGATAAGAAATTCCGCAAACACGATTGATCTTGATCAGCTAGATATTTGA 2253 0.4217 MALLLFVLRPPPPPPPRTLRFFMASSRLFSATSSHSFFHFHPLPHSSATLSSSFSLSTSPSSLFKPRVSLQLGKLPSFRLVQNGVTPRAYMSSLSAAETSQRSESSKAYGSDQIQVLEGLDPVRKRPGMYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKIDVVLQSDGSVSITDDGRGIPTDLHPVTKKSALETVLTVLHAGGKFGGANSGYSVSGGLHGVGLSVVNALSEVLEVTVWRDGLEFKQKYSRGKPITTLTCLVLSNEKKDRQGTSIRFWPDKEVFTTAIQFDYNTIAGRIRELAFLNPKLTITLQKEDDDPEKIQYNEYFFAGGLVEYVKWLNTDKKALHDVLSFSKETDGISIDIAFQWCEDAYSDTILGYANSIRTIDGGTHIDGMKASLTRTLNSLGKKSKVIKDKDITLSGEHVREGLTCVVSVKVPNPEFEGQTKTRLGNPEVRKVVDQALQEYLSEYLELHPDVLDSILSKAVNAFKAALAAKRARELVRQKSVLRSSSLPGKLADCSSTNPEECEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKMEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQRALFDEGCIYVGVPPLYKVVRGKQVNYCYDDADLKKLRKTFPPNASYTIQRFKGLGEMMPLQLWETTMDPERRLLKRLTVEDAAEANIVFSSLMGTRVDVRKDLIRNSANTIDLDQLDI* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0510 750 CDD TopoII_Trans_DNA_gyrase 333 490 - -
Ahy16g0510 750 PRINTS DNA gyrase subunit B signature 305 318 IPR000565 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Ahy16g0510 750 PRINTS DNA gyrase subunit B signature 109 119 IPR000565 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Ahy16g0510 750 PRINTS DNA gyrase subunit B signature 583 592 IPR000565 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Ahy16g0510 750 PRINTS DNA gyrase subunit B signature 290 305 IPR000565 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Ahy16g0510 750 PRINTS DNA gyrase subunit B signature 333 355 IPR000565 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Ahy16g0510 750 PRINTS DNA gyrase subunit B signature 487 507 IPR000565 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Ahy16g0510 750 PRINTS DNA gyrase subunit B signature 473 487 IPR000565 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Ahy16g0510 750 PRINTS DNA gyrase subunit B signature 425 441 IPR000565 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Ahy16g0510 750 PRINTS DNA gyrase subunit B signature 701 713 IPR000565 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Ahy16g0510 750 PRINTS DNA gyrase subunit B signature 717 733 IPR000565 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Ahy16g0510 750 ProSiteProfiles Toprim domain profile. 531 638 IPR006171 -
Ahy16g0510 750 CDD TOPRIM_TopoIIA_GyrB 531 645 IPR034160 -
Ahy16g0510 750 Gene3D - 512 750 IPR013759 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Ahy16g0510 750 TIGRFAM gyrB: DNA gyrase, B subunit 109 749 IPR011557 GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265
Ahy16g0510 750 Gene3D - 332 511 IPR014721 -
Ahy16g0510 750 SMART topII5 138 741 IPR001241 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Ahy16g0510 750 Pfam DNA gyrase B subunit, carboxyl terminus 676 736 IPR002288 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Ahy16g0510 750 SUPERFAMILY Type II DNA topoisomerase 508 746 IPR013760 GO:0003918|GO:0005524
Ahy16g0510 750 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 109 323 IPR036890 -
Ahy16g0510 750 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 136 283 IPR003594 -
Ahy16g0510 750 SMART HKATPase_4 134 284 IPR003594 -
Ahy16g0510 750 PANTHER DNA GYRASE/TOPOISOMERASE SUBUNIT B 49 750 - -
Ahy16g0510 750 Pfam Toprim domain 532 633 IPR006171 -
Ahy16g0510 750 ProSitePatterns DNA topoisomerase II signature. 535 543 IPR018522 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Ahy16g0510 750 Gene3D - 105 331 IPR036890 -
Ahy16g0510 750 SUPERFAMILY Ribosomal protein S5 domain 2-like 334 504 IPR020568 -
Ahy16g0510 750 CDD HATPase_GyrB-like 139 323 - -
Ahy16g0510 750 PANTHER DNA GYRASE SUBUNIT B 49 750 - -
Ahy16g0510 750 Pfam DNA gyrase B 334 503 IPR013506 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Ahy16g0510 750 PRINTS DNA topoisomerase II family signature 218 232 - -
Ahy16g0510 750 PRINTS DNA topoisomerase II family signature 600 616 - -
Ahy16g0510 750 PRINTS DNA topoisomerase II family signature 680 696 - -
Ahy16g0510 750 PRINTS DNA topoisomerase II family signature 638 650 - -
Ahy16g0510 750 PRINTS DNA topoisomerase II family signature 381 394 - -
Ahy16g0510 750 PRINTS DNA topoisomerase II family signature 533 547 - -
Ahy16g0510 750 PRINTS DNA topoisomerase II family signature 138 153 - -
Ahy16g0510 750 PRINTS DNA topoisomerase II family signature 173 186 - -
Ahy16g0510 750 PRINTS DNA topoisomerase II family signature 618 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0510 Ahy-Chr16 9392793 9400912 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0510 K02470 - gmx:100807172 1187.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0510 16 9392793 9400912 Ahy16g0510 16 9392793 9400912 ECH
Ahy16g0510 16 9392793 9400912 Ahy6g0823 6 10286201 10294298 hybridization