Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0794 ATGAATCCGCCCACGATAGACTTCAAGGTGGATCTCAATTCAGAGAGGGTTGAAGAAGAGAAAATGGAAGGGGGTTCTATGCTTTATTGTGATCTTTGTGATACAGAAGTAGTTTACAAGTTGGCGCAAATGTTGCTTCCAGGGCTAGCAACTTCCTGTGTTGATAGCACAGCTGGGAGCTTCAAGACTCCTGGTTCAGTGGCTGTTGATTTGAGAAAGGAAATGATAATCTATATTACGCAGAGAAGCGAAACGTTTGTCGCTGAGTCTATTGTCTTGGATGGTGGTCCTAATGGTGAAGAATCGGATCATCCTTTTGATATCATTTCTAACTTTGTTGATGACTTTGCTATTTCAAAGAGGAATTTATTTACCCGGGTTTCTGGATTGCTACTCACTGATATGAGAGAAGACAAGATTGATGATTTCATGCAGGAGATGGAACTGACTGGTTTTTGGCCACTGGAAAGAAGAGAAACGATTGCAGAGGCGATTCTAAAGAATGTTGACATCAAGAATGAATTTCATTGTGCTATGAAGTTCAGATCTGTAGATGATCTTGCTGTTCATGCTTTCCATTGTAACTTCAGACCTCTATTCTGCGAAAATGAGGGATGCAATGCAAGGTTAATTGCAAAACATTTGGAAAAGCATGACTCAATTTGTCCTTTCAAAATAATTCCATGTGAGCAGAAGTGTTCAGATAGCATTATGAGGCGTGCAATGGACAGACACTGTATCACTGTTTGTCCCATGAAGCTTGTAGATTGTCCATTTCATTCGTTAGGTTGTCGATCTGCTATAGCACAATGTGTGATCGAAAAGCACTGCGCAGATGATGTTCGTTCTCACTTGTGGCACTTGCTTAAAGGCATGTACAAGCAAGCATCTGGGGAAGATCTTCAAAGACGGGTACAGCAAATTGTACAGGCATCACCAGGCAGCAGGTTAGCAGAGGCCCGGGATGTGAGATCTCTAAACTTTGTTGTCAAGGATATTGAAGCTAAGCTAGGGCCTTTTGAGTTGGGTTCTGCGAAAAAAAATAGCACAGAGACTCTCACCAAAAACAATGGTGGGAAAAATGTTGCCACCAATGCAAACGGCAGTGAAGAAAGCTCAAAGACTCCAGATTTGATAAATTCATCACATCAAGCTGAAGTCAGTGCTGAGAAGAAAAATAGTGTAGAGACTATCGCTAATAACAACAATGGGGGAAATAGTGTTGCCAATGCAAAGGGCAGTGGAGAGAGCACAAAGGCTCCAGATATGGGAAATTCATCCAATAAAGCTGAACGGAGTTTTGAGAAGAAAAATATCGCAGAGACTGTTGCCGAATACGACGATGGGAGAAGTAGTGTTACCAATACAAATGGCAGTGAAGAGAGCACAAATGCTCTACATATGGTAAATTTATATACAACTGAAGTGAGTGCTGATAAAAAAGATAGCTTAGATATTACAACCAATGAGAAGGGCAGTGAAGAGAGCACAGAGGCTTTAGATATGGTAGATTTACTAGAAAAAGTTGAAGCGCGCGGTATCATCCATATGGATAGTTCAGAGAATACTGAGAACAAAGATGGCAAACATAGTCACATTGAAAGCAGGAAGAGCAACGAGAGGGAAACGATTCACATTGAAAGCAATGGCAGCGAAGAAAGAACACAGAGTTGCATTGAAAGCAAGAGCAACGAAGTTGATAAACAGAATCCAATTATGGCTAGTTTATCAAATGAAGATGAAACTAGCCTTATGAACATGGACGGTGTGCAGATGTACATCAAAACCAAAGATGGTGAAGGTAATGGTGAATATAAATTCAAGGGCAATGAGGAGAGCACCCAGACAAATATGAAAAATTTATCAGACAAAGGAGAAATTAGTGCCGCAAATGAGGACAGTGCAGAGAATAGCACCGTAAATAAACATATTGGATCTAATAGCTTTGAAGATGAAGATAATGAACAAAGGATACAGAATCCAAAAATGGAAACTAACTCTAATGCACAGCACAATGTTAACAACAAAGATATCGACGATGAAGATTTAGAAGAAAAACTACAACTTCAAGCTTCAAAAGTTCAACATTTATCTGATAAAGCTCATGTCATGGATGATAAAGGATATGCTATGGAGAGTGATGTCAGTGAAAGGCTGATATACAACCAATCCAGTTCATAA 2181 0.3994 MNPPTIDFKVDLNSERVEEEKMEGGSMLYCDLCDTEVVYKLAQMLLPGLATSCVDSTAGSFKTPGSVAVDLRKEMIIYITQRSETFVAESIVLDGGPNGEESDHPFDIISNFVDDFAISKRNLFTRVSGLLLTDMREDKIDDFMQEMELTGFWPLERRETIAEAILKNVDIKNEFHCAMKFRSVDDLAVHAFHCNFRPLFCENEGCNARLIAKHLEKHDSICPFKIIPCEQKCSDSIMRRAMDRHCITVCPMKLVDCPFHSLGCRSAIAQCVIEKHCADDVRSHLWHLLKGMYKQASGEDLQRRVQQIVQASPGSRLAEARDVRSLNFVVKDIEAKLGPFELGSAKKNSTETLTKNNGGKNVATNANGSEESSKTPDLINSSHQAEVSAEKKNSVETIANNNNGGNSVANAKGSGESTKAPDMGNSSNKAERSFEKKNIAETVAEYDDGRSSVTNTNGSEESTNALHMVNLYTTEVSADKKDSLDITTNEKGSEESTEALDMVDLLEKVEARGIIHMDSSENTENKDGKHSHIESRKSNERETIHIESNGSEERTQSCIESKSNEVDKQNPIMASLSNEDETSLMNMDGVQMYIKTKDGEGNGEYKFKGNEESTQTNMKNLSDKGEISAANEDSAENSTVNKHIGSNSFEDEDNEQRIQNPKMETNSNAQHNVNNKDIDDEDLEEKLQLQASKVQHLSDKAHVMDDKGYAMESDVSERLIYNQSSS* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0794 726 MobiDBLite consensus disorder prediction 515 571 - -
Ahy6g0794 726 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 218 282 IPR013083 -
Ahy6g0794 726 MobiDBLite consensus disorder prediction 515 549 - -
Ahy6g0794 726 MobiDBLite consensus disorder prediction 625 684 - -
Ahy6g0794 726 Pfam TRAF-type zinc finger 218 276 IPR001293 GO:0008270
Ahy6g0794 726 MobiDBLite consensus disorder prediction 348 434 - -
Ahy6g0794 726 PANTHER TNF RECEPTOR ASSOCIATED FACTOR 1 457 IPR043211 -
Ahy6g0794 726 ProSiteProfiles Zinc finger TRAF-type profile. 218 265 IPR001293 GO:0008270
Ahy6g0794 726 MobiDBLite consensus disorder prediction 597 616 - -
Ahy6g0794 726 SUPERFAMILY TRAF domain-like 183 235 - -
Ahy6g0794 726 PANTHER NEUROFILAMENT HEAVY POLYPEPTIDE-LIKE 1 457 - -
Ahy6g0794 726 MobiDBLite consensus disorder prediction 550 571 - -
Ahy6g0794 726 MobiDBLite consensus disorder prediction 348 428 - -
Ahy6g0794 726 MobiDBLite consensus disorder prediction 631 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0794 Ahy-Chr6 10010831 10014160 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0794 - - ahf:112695902 1430.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3365 16 150558960 150562312 Ahy6g0794 6 10010831 10014160 hybridization
Ahy6g0794 6 10010831 10014160 Ahy2g2337 2 99554316 99557004 PCT
Ahy2g2337 2 99554316 99557004 Ahy6g0794 6 10010831 10014160 PCT