Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0696 ATGGCTGTAGTTGGAGTCGGTGTGCAGCAACAGTTTTTGTGTTCCTCTGAATCAAAGTGGAGCATTCCAACTACGCCATGCAATCCCCTTACGAACTCCATTCTCATACGCCCATTCAAAAAGATTCAATTTTCAGTCATTTCATGCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCACCACCGTCACAGGCCGCAGAAGCTGAAACTCAAACTGCTGAATCTTGCGTCAATTTAGGTCTTCAGCTCTTCTCCAAAGGAAGGGTTAAGGATGCTTTAGCCCAGTTTGAAACAGCGCTTACCTTGAATCCCAATCCTGTGGAGGCCCAAGCTGCTTTCTACAACAAAGCTTGCTGCCACGCATACAGAGGGGAAGGAAAGAAAGCTGCCGATAGTCTCCGTATTGCTTTGAGGGAATACAACCTAAAATTTGGTACAATTCTCAATGATCCAGACTTGGCCTCTTTTAGAGCTTTGCCTGAGTTCAAAGAACTACAAGAAGAGGCCAGGATAGGTGGGGAAGATATTGGCAACAGTTTTCGGAGAGATCTAAAACTTATTAGTGAAGTTCAGGCACCGTTTCGTGGGGTTAGGAGGTTTTTTTATGTGGCATTCACAGCAGCTGCAGGAATATCATTGTTCTTCACTCTACCCAGGCTAATCCGTGCAATTCAAGGTGGTGATGGTGCTCCTGATCTACTGGAAACTGCAGGGAATGCTGCCATTAACATTGGAGGCATTGTTGCTTTTGTGGCATTATTTTTTTGGGACAATAAAAAGGAGGAGGAGCAGATTGAACAAATATCTCGAGATGAGACACTATCAAGGCTGCCTTTGCGCTTAACAACTAATCGTGTAGTTGAACTTGTTCAGCTACGGGACACAGTTAGGCCGGTTATATTAGCTGGGAAAAAAGAAACAGTATCTTTGGCTTTGCAAAGAGCAGAACGATTTCGCACTGAGCTCGTTAGACGTGGTGTCCTGTTAGTTCCTGTCATATGGGGAGAAGGTAGGGAAACCAAAACAAAAACAAAAATTGAGAAGAAAGGTTTTGGTCGTCCACAAAAGGCTGCTGAAGCTCTTCCGTCCATTGGGGAAGATTTTGATAAGCGAACACAGTCCATAGCTTCAAAATCAAAGTTGAAAGCAGAAATCAGGTTCAAGGCTGAAGTTGTATCGCAAGCAGAATGGGAACAGTGGATAAGAGATCAGCAGAAATCTGAAGGAGTTACTGTTGGCGAAGACGTGTACATAATAATGCGCTTAGATGGGAGGATTCGAAGATCGGGGAAAGGAATGCCTGACTGGCAGCAAATTGTGAAGGAGCTACCAGAAATGGAAGCATTTTTAAGCAAGCTAGAAAGATGA 1371 0.4398 MAVVGVGVQQQFLCSSESKWSIPTTPCNPLTNSILIRPFKKIQFSVISCSSSSSSSSSSSSPPSQAAEAETQTAESCVNLGLQLFSKGRVKDALAQFETALTLNPNPVEAQAAFYNKACCHAYRGEGKKAADSLRIALREYNLKFGTILNDPDLASFRALPEFKELQEEARIGGEDIGNSFRRDLKLISEVQAPFRGVRRFFYVAFTAAAGISLFFTLPRLIRAIQGGDGAPDLLETAGNAAINIGGIVAFVALFFWDNKKEEEQIEQISRDETLSRLPLRLTTNRVVELVQLRDTVRPVILAGKKETVSLALQRAERFRTELVRRGVLLVPVIWGEGRETKTKTKIEKKGFGRPQKAAEALPSIGEDFDKRTQSIASKSKLKAEIRFKAEVVSQAEWEQWIRDQQKSEGVTVGEDVYIIMRLDGRIRRSGKGMPDWQQIVKELPEMEAFLSKLER* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0696 456 Pfam Tetratricopeptide repeat 74 106 IPR013105 -
Ahy6g0696 456 Gene3D Tetratricopeptide repeat domain 52 153 IPR011990 GO:0005515
Ahy6g0696 456 ProSiteProfiles TPR repeat profile. 74 107 IPR019734 GO:0005515
Ahy6g0696 456 PANTHER PROTEIN LOW PSII ACCUMULATION 1, CHLOROPLASTIC 41 456 - -
Ahy6g0696 456 SUPERFAMILY TPR-like 66 140 IPR011990 GO:0005515
Ahy6g0696 456 SMART tpr_5 74 107 IPR019734 GO:0005515
Ahy6g0696 456 PANTHER PROTEIN LOW PSII ACCUMULATION 1, CHLOROPLASTIC 41 456 - -
Ahy6g0696 456 Pfam Low psii accumulation1 / Rep27 182 259 IPR021883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0696 Ahy-Chr6 8519177 8522307 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0696 - - gmx:100784188 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0605 16 11362385 11364649 Ahy6g0696 6 8519177 8522307 hybridization