Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0690 ATGGAGGTGATGCGTCACTGTTCAAGGTTCCTTCTTCCTCCCAACACCAACGATACTCGTTTTATGAGGTACGCTCTTGTGGTCCTCAATCAACGTCTTCCTAGATTCGCTGCTCTCCTTTGGGACCACGCGCAGGTGCGAGTGTGTGCTGATGGAGGTGCCAACAGGGTGTTTGATGAAATGCCTCTTCTCTTCCCTCTTCAACATCCTTCCCATGTTCGCTCCAGGTACAAGCCAGATGTAATCAAAGGCGACATGGATTCTATCAGGGAAGATGTCCTTCATTTCTATACAAACCTTGGGACAAAGATACTTGATGCTTCTCATGATCAGGATACTACCGATTTGCACAAATGTGTAGCATACTTACATGACCTAACAACACCAAATACTGATGAATCAGCTTTGTGTATTCTTGTTGCTGGAGCTCTTGGTGGGAGATTTGACCATGAGATGGGAAATATCAATGTTCTCTGCCGATTCTCCAGCACACGAATTATCCTTCTATCTGATGATTGCCTTATTCAGCTTCTTCCAAAGAATCACCGCCATGAGATAGTTATTCAATCTTCCGTCGAGGGTCCGCATTGTGGACTTATTCCCATTGGGATGCCATCTGCAAGTTCTACCACCACCGGACTCCAGTGGGACCTCAATGACACGGAGATGAAATTTGGAGGTTTAATAAGCACCTCAAATATTGTAAAAGGGGATATTGTAACAGTAGAGTCTGATTCAGATCTTCTTTGGACTATTTCTATCAAGAAACTGTAG 774 0.4444 MEVMRHCSRFLLPPNTNDTRFMRYALVVLNQRLPRFAALLWDHAQVRVCADGGANRVFDEMPLLFPLQHPSHVRSRYKPDVIKGDMDSIREDVLHFYTNLGTKILDASHDQDTTDLHKCVAYLHDLTTPNTDESALCILVAGALGGRFDHEMGNINVLCRFSSTRIILLSDDCLIQLLPKNHRHEIVIQSSVEGPHCGLIPIGMPSASSTTTGLQWDLNDTEMKFGGLISTSNIVKGDIVTVESDSDLLWTISIKKL* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0690 257 PIRSF TPK1 1 257 IPR016966 GO:0004788|GO:0005524|GO:0009229
Ahy6g0690 257 Pfam Thiamin pyrophosphokinase, catalytic domain 38 166 IPR007371 GO:0004788|GO:0005524|GO:0009229
Ahy6g0690 257 SMART TPK_B1_binding_a_2_a 182 248 IPR007373 GO:0009229|GO:0030975
Ahy6g0690 257 CDD TPK 25 252 IPR007371 GO:0004788|GO:0005524|GO:0009229
Ahy6g0690 257 TIGRFAM thi_PPkinase: thiamine pyrophosphokinase 26 252 IPR006282 GO:0004788|GO:0006772
Ahy6g0690 257 Gene3D Thiamin pyrophosphokinase, catalytic domain 24 165 IPR036759 GO:0004788|GO:0005524|GO:0009229
Ahy6g0690 257 Gene3D - 166 256 - -
Ahy6g0690 257 PANTHER THIAMINE PYROPHOSPHOKINASE 1 3 255 - -
Ahy6g0690 257 SUPERFAMILY Thiamin pyrophosphokinase, substrate-binding domain 177 256 IPR036371 GO:0009229
Ahy6g0690 257 SUPERFAMILY Thiamin pyrophosphokinase, catalytic domain 16 174 IPR036759 GO:0004788|GO:0005524|GO:0009229
Ahy6g0690 257 Pfam Thiamin pyrophosphokinase, vitamin B1 binding domain 183 249 IPR007373 GO:0009229|GO:0030975
Ahy6g0690 257 PANTHER THIAMIN PYROPHOSPHOKINASE 3 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0690 Ahy-Chr6 8480450 8483288 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0690 K00949 - gmx:100786303 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0611 16 11406003 11410375 Ahy6g0690 6 8480450 8483288 hybridization