Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0611 ATGGAGGTGATGCGTCACTGTTCAAGGTTCCTTCTTCCTCCCAACAGCAACGATACTCGTTGTATGAGGTACGCTCTTGTGGTCCTCAATCAACGTCTTCCTAGATTCGCTGCTCTCCTTTGGGACCACGCGCAGGTGCGAGTGTGTGCTGATGGAGGTGCCAACAGGGTGTTTGATGAAATGCCTCTTCTCTTCCCTCTTCAACATCCTTCCCAAGTTCGCTCCAGGTACAAGCCAGATGTAATCAAAGGCGACATGGATTCTATCAGGAAAGATGTCCTTCATTTCTATACAAACCTTGGGACAAAGATACTTGATGCTTCTCATGATCAGGATACTACCGATTTGCACAAATGTGTAGCATACTTACGTGACCTAACAACACCAAATACTGATGAATCAGCTTTGTGTATTCTTGTTGCTGGAGCTCTTGGTGGGAGATTTGACCATGAGATGGGAAATATCAATGTTCTCTGCCGATTCTCCAGCACACGAATTATCCTTCTATCTGATGATTGCCTTATTCAGCTTCTTCCAAAGAATCACCGCCATGAGATAGTTATTCAATCTTCCGTCGAGGGTCCGCATTGTGGACTTATTCCCATTGGGATGCCATCTGCAAGTTCTACCACCACCGGACTCCAGTGGGACCTCAGTTATTGA 663 0.4615 MEVMRHCSRFLLPPNSNDTRCMRYALVVLNQRLPRFAALLWDHAQVRVCADGGANRVFDEMPLLFPLQHPSQVRSRYKPDVIKGDMDSIRKDVLHFYTNLGTKILDASHDQDTTDLHKCVAYLRDLTTPNTDESALCILVAGALGGRFDHEMGNINVLCRFSSTRIILLSDDCLIQLLPKNHRHEIVIQSSVEGPHCGLIPIGMPSASSTTTGLQWDLSY* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0611 220 Gene3D - 166 220 - -
Ahy16g0611 220 PANTHER THIAMIN PYROPHOSPHOKINASE 3 218 - -
Ahy16g0611 220 SUPERFAMILY Thiamin pyrophosphokinase, catalytic domain 18 174 IPR036759 GO:0004788|GO:0005524|GO:0009229
Ahy16g0611 220 Pfam Thiamin pyrophosphokinase, vitamin B1 binding domain 183 218 IPR007373 GO:0009229|GO:0030975
Ahy16g0611 220 PIRSF TPK1 1 220 IPR016966 GO:0004788|GO:0005524|GO:0009229
Ahy16g0611 220 TIGRFAM thi_PPkinase: thiamine pyrophosphokinase 26 219 IPR006282 GO:0004788|GO:0006772
Ahy16g0611 220 CDD TPK 25 219 IPR007371 GO:0004788|GO:0005524|GO:0009229
Ahy16g0611 220 PANTHER THIAMINE PYROPHOSPHOKINASE 1 3 218 - -
Ahy16g0611 220 Gene3D Thiamin pyrophosphokinase, catalytic domain 24 165 IPR036759 GO:0004788|GO:0005524|GO:0009229
Ahy16g0611 220 SUPERFAMILY Thiamin pyrophosphokinase, substrate-binding domain 176 219 IPR036371 GO:0009229
Ahy16g0611 220 Pfam Thiamin pyrophosphokinase, catalytic domain 38 166 IPR007371 GO:0004788|GO:0005524|GO:0009229
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0611 Ahy-Chr16 11406003 11410375 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0611 K00949 - gmx:100786303 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0611 16 11406003 11410375 Ahy16g0611 16 11406003 11410375 ECH
Ahy16g0611 16 11406003 11410375 Ahy6g0690 6 8480450 8483288 hybridization