Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0673 ATGAAGTCGAAAACAGTAATGCAATTTAAGCAGTGCCACATAAATTTTGCTATAGGACATATATGTTCTGCATATATTTATGATGATCAATGGTCGTGTCTTGATCTCAACATGTCCACCCCTCAACCTATAAGGAAACAAGTTTTCGATTGTCATCAAACGCAAGCGATAATGAAATCCTCAATTGCACTCGTATGTGTCCTTCTATACGCCACAGTTTCACTCGCATCCCAGCAAGAAGATCAGAAGCTAACAGCATACGATGTTCTAGAACAGTACGATTTTCCAGTGGGTCTTCTTCCCAAGGGTGCAACCGGGTATGAGCTTGACGCAAAGACGGGTCAGTTCACTGCTTATTTGAATGGAACTTGCAGCTTCAGCATTGAATCTTACGAGCTCAAGTACAAATCCACCATCAAGGGAGTGATCTCGAAAGGTAGGTTGGCGAAGCTGAAGGGTGTGAGTGTCAAGGTTGCACTCTTGTGGCTCAACATCGTTGAGGTCACCCGTAACGATGATGAACTCCAATTCTCCGTTGGTATTGCCTCCGCCGACTTTGCCGTCAACAACTTTCTCCAATGCCCCCAGTGTGGATGTGGATTCGATTGCAACAATTCCCGGGAAAACAACGGTTCTATCTCCTCATTTGAAGAGTTGGCGAGATCCTTCATCGACTACTTCGCAGCTTCGAGGATATATGTACACGGATCATATTACCTTGGCACCATCAGACAAGGACAACACGAAAGTTTAAAGGAATACATGACTCGGTTTGTTGAAGCAACCATGAAAATACTAGATCTAGACCCAGCAGTCCACTTGCACGCCTTCAAGGCCGGCCTCCGACCCGGTAAGTTCCGAGAGACAATCGCGGTTACTAAACCGAAGACGCTGGAGGAATTCTGA 906 0.4558 MKSKTVMQFKQCHINFAIGHICSAYIYDDQWSCLDLNMSTPQPIRKQVFDCHQTQAIMKSSIALVCVLLYATVSLASQQEDQKLTAYDVLEQYDFPVGLLPKGATGYELDAKTGQFTAYLNGTCSFSIESYELKYKSTIKGVISKGRLAKLKGVSVKVALLWLNIVEVTRNDDELQFSVGIASADFAVNNFLQCPQCGCGFDCNNSRENNGSISSFEELARSFIDYFAASRIYVHGSYYLGTIRQGQHESLKEYMTRFVEATMKILDLDPAVHLHAFKAGLRPGKFRETIAVTKPKTLEEF* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0673 301 Pfam Protein of unknown function, DUF538 86 191 IPR007493 -
Ahy6g0673 301 PANTHER DUF538 FAMILY PROTEIN 63 213 - -
Ahy6g0673 301 Pfam Retrotransposon gag protein 209 283 IPR005162 -
Ahy6g0673 301 Gene3D - 70 194 IPR036758 -
Ahy6g0673 301 PANTHER T31J12.3 PROTEIN-RELATED 63 213 IPR007493 -
Ahy6g0673 301 SUPERFAMILY At5g01610-like 60 203 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0673 Ahy-Chr6 8294821 8298732 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0673 - - ahf:112695788 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0631 16 11637866 11639333 Ahy6g0673 6 8294821 8298732 hybridization
Ahy6g0673 6 8294821 8298732 Ahy12g2656 12 116202737 116203923 PCT
Ahy12g2656 12 116202737 116203923 Ahy6g0673 6 8294821 8298732 PCT