Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2656 ATGGGTACTATCAATTTTCAAGCAAAACCCATATCCCGAAATCTAATATTTCTCACAACCTTGATCTTGATCTTCATCTCAACCCCATCATTATCCTCTAATGAAGAAAACACAACCACCTTAACTGCTTATGATGTTCTTCAAAAATTCAACTTCCCAATTGGGCTTCTCCCAAACGGTGTTCTAAGCTACGAATTAGACCCTTCCACGGGTAACTTCAAAGCTTACTTAGATGGCACTTGCACGTTCAAGATTGAGTCCTATGATTTGAACTATAAGTCAACCATAACAGGTGTCATCACCAAGAACAAGATCTCTAACTTAAGTGGTATTCAGGTTAAGGTTTTGTTCCTTTGGTTGAACATTGTGTCGGTGACACGTGTTGACGATGAGTTACAATTCTCGGTTGGGATTGCATCTGCTGATTTTGCGGTTAGTAATTTCTATGAGTCTCCCACTTGTGGTTGTGGATTTGATTGTGTAAATTTGGCTAATAAGGTCATTAATCATGGGAACATGTCATCACATGATTATGTTATGTCTTCTTAA 549 0.3825 MGTINFQAKPISRNLIFLTTLILIFISTPSLSSNEENTTTLTAYDVLQKFNFPIGLLPNGVLSYELDPSTGNFKAYLDGTCTFKIESYDLNYKSTITGVITKNKISNLSGIQVKVLFLWLNIVSVTRVDDELQFSVGIASADFAVSNFYESPTCGCGFDCVNLANKVINHGNMSSHDYVMSS* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2656 182 PANTHER DUF538 FAMILY PROTEIN 22 166 - -
Ahy12g2656 182 Pfam Protein of unknown function, DUF538 43 148 IPR007493 -
Ahy12g2656 182 PANTHER T31J12.3 PROTEIN-RELATED 22 166 IPR007493 -
Ahy12g2656 182 Gene3D - 27 153 IPR036758 -
Ahy12g2656 182 SUPERFAMILY At5g01610-like 17 160 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2656 Ahy-Chr12 116202737 116203923 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2656 - - adu:107475976 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0631 16 11637866 11639333 Ahy12g2656 12 116202737 116203923 PCT
Ahy6g0673 6 8294821 8298732 Ahy12g2656 12 116202737 116203923 PCT
Ahy12g2656 12 116202737 116203923 Ahy16g0631 16 11637866 11639333 PCT
Ahy12g2656 12 116202737 116203923 Ahy6g0673 6 8294821 8298732 PCT