Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0662 ATGTGTCACTTCACCTTCCTTGGTTGGTTGCTTCTTTCTCTCTCACTCAACATGCCTCTCTTCCTACCTTCTTTGTTTTTCCTTCTTTCTCTTCTCTCAACCACTCTTCTCTCTCACTCCTTCCCCTTCCCCAACCATGGCCACCGCCCTCACCCTCACCATTTCGCCTCTCACAACTACAGAGATGCTCTCAGCAAGTCCATCATCTTCTTTGAAGGCCAGAGGTCTGGCAAGCTCCCTTCTAACCAGAGGATAACCTGGAGGAGAGACTCTGCTCTCTCTGATGGCTCTGCCATGCATGTTGATTTGGTGGGAGGGTACTACGATGCAGGGGACAATGTGAAGTTCGGTTTTCCGATGGCATTCACGACCACCATGCTATCATGGAGTGTTCTCGAGTTCGGTGGGGTCATGAAGGGCGAGTTGCAGAATGCCAGAGAGGCCATCCGCTGGGGAACTGATTACCTTCTCAAAGCCACTGCACATCCTGGCACCATTTATGTTCAGGTGGGAGACGCTAAGAAGGACCACGCGTGTTGGGAGAGGCCAGAAGACATGGATACTCCAAGAAATGTGTACAAGATAGACCATAATACCCCTGGTTCAGAAGTGGCCGCGGAAACCGCTGCGGCTCTTGCAGCTGCTTCTCTTGTTTTCAAGAAAACCGACCCCACCTACTCCAAAATTTTGGTTAGGAGGGCCATCTCTGTTTTCCAATTTGCTGATAAATACAGAGGATCATACAGCAATGGGTTGAAGCCATTTGTGTGCCCGTTCTACTGCTCTTACTCAGGCTATGAGGATGAGCTTCTTTGGGGTGCTGCTTGGTTGCACAAGGCTACTAGGAACTCCATCTATCTTAACTACATTAAGGTTAATGGACAAACACTTGGTGCTGCAGAATCTGACAATACATTTGGGTGGGATAACAAGCATGTTGGAGCAAGAATCCTTCTCTCTAAGGAATTTCTTGTTCAGAAAGTGCAAACCCTGCATGACTACAAGGGTCACGCGGACAATTTCATCTGTTCCCTCATTCCAGGAACCTCTTTCTCTTCGGCACAATACACACCAGGTGGGCTTCTATTCAAGATGAGTGATAGCAACATGCAGTATGTTACATCCACCTCCTTCCTTCTCTTAACCTATGCCAAATACTTGACCAAATCCCACACCGTCGTCAACTGTGGCGGCACCACCGTTACTCCCAAGAGGCTCCGTGCAATAGCCAAAAAGCAGGTGGATTACTTGCTGGGAGACAATCCCTTGAAGATGTCGTACATGGTGGGGTATGGTCCAAGGTACCCAAGAAGGATACACCACCGGGGATCATCTCTGCCGTCCATTTCTGTACACCCTGGCAAGATCCAATGCTCAGCAGGGTTCGGTGTCATGAACTCACAATCCCCCAACCCCAACGTTCTTGTTGGTGCTGTGATTGGAGGGCCGGATCTGCATGATAGGTTCCCGGATCAACGGTCAGATTATGAGCAGTCAGAGCCAGCCACTTATATGAACGCACCTCTTGTGGGTGCACTCGCTTATCTTGCACACTCATTTGGCCAACTCTGA 1572 0.4943 MCHFTFLGWLLLSLSLNMPLFLPSLFFLLSLLSTTLLSHSFPFPNHGHRPHPHHFASHNYRDALSKSIIFFEGQRSGKLPSNQRITWRRDSALSDGSAMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVLEFGGVMKGELQNAREAIRWGTDYLLKATAHPGTIYVQVGDAKKDHACWERPEDMDTPRNVYKIDHNTPGSEVAAETAAALAAASLVFKKTDPTYSKILVRRAISVFQFADKYRGSYSNGLKPFVCPFYCSYSGYEDELLWGAAWLHKATRNSIYLNYIKVNGQTLGAAESDNTFGWDNKHVGARILLSKEFLVQKVQTLHDYKGHADNFICSLIPGTSFSSAQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTKSHTVVNCGGTTVTPKRLRAIAKKQVDYLLGDNPLKMSYMVGYGPRYPRRIHHRGSSLPSISVHPGKIQCSAGFGVMNSQSPNPNVLVGAVIGGPDLHDRFPDQRSDYEQSEPATYMNAPLVGALAYLAHSFGQL* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0662 523 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 416 442 IPR018221 -
Ahy6g0662 523 Gene3D - 55 523 IPR012341 GO:0005975
Ahy6g0662 523 SUPERFAMILY Six-hairpin glycosidases 57 521 IPR008928 GO:0005975
Ahy6g0662 523 PANTHER ENDOGLUCANASE 17 28 523 - -
Ahy6g0662 523 Pfam Glycosyl hydrolase family 9 60 513 IPR001701 GO:0004553|GO:0005975
Ahy6g0662 523 PANTHER ENDO-1,4-BETA-GLUCANASE 28 523 - -
Ahy6g0662 523 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 489 507 IPR033126 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0662 Ahy-Chr6 8176214 8178405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0662 18 519 Glycoside Hydrolase AT1G02800 73.465 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0662 K01179 - gmx:100789144 892.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0652 16 12125784 12127957 Ahy6g0662 6 8176214 8178405 hybridization
Ahy6g0662 6 8176214 8178405 Ahy12g2664 12 116282446 116286406 PCT
Ahy12g2664 12 116282446 116286406 Ahy6g0662 6 8176214 8178405 PCT