Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2664 ATGGCTTTCTTTGTTTCTTCCATCACTACTTTGTTCTCTCTTTTCACCATCACTTGTATTTCCATTGTTACTCTTCCACATTGTGATGCTTTTCCATTACATTACAATCACCACCCTTTGTTGCACCCTCACCACCATCACCCTCACATTGCTAGTCACAATTACAGAGATGCCCTCACAAAATCTATAATGTTCTTTGAAGGCCAGAGGTCTGGTAAGCTCCCTCCTAACCAGAGAATGTCTTGGAGGAGAGATTCTGGTCTCTATGATGGCTCAGCTCTTCATGTTGATTTGGTTGGAGGGTACTATGATGCTGGGGACAATGTGAAGTTTGGATTTCCAATGGCATTCACCATAACCATGTTGTCATGGAGTGTTCTTGAGTTTGGTGGACTAATGAGAGGAGAGTTGCAGAATGCAAGAGAAGCAATTCATTGGGGGACTGATTATCTTCTCAAAGCTACTGCATATCCAAACACCATTTTTGTTCAGGTGGGAGATGCTAAGAAGGACCATGCTTGTTGGGAGAGACCAGAGGACATGGACACACCAAGAAGTGTGTTCAAGATTGATGCAAACAACCCTGGTTCAGAAGTTGCTGCTGAAACTGCTGCAGCTCTTGCAGCAGCTTCCCTTGTTTTCAGAAGAAGTGACCCCATGTACTCCAAGATTTTGGCCAGAAGGGCCATTAAGGTCTTCCAATTTGCTGATAAATATAGAGGATCATACAGCAATGCATTGAAGCCTGTTGTGTGCCCCTATTATTGCTCTTACTCTGGTTATCAGGATGAGTTGTTGTGGGGTGCTGCTTGGTTGCACAAGGCCACCAAGAATCCAATGTATCTTAACTACATTCAAGTCAATGGTCAGATCCTTGGTGCTGCAGAGTATGATAACACTTTTGGGTGGGATAACAAGCATGTTGGGGCAAGGATACTTCTTTCCAAGGAATTTCTTGTCCAAAAGGAGCAATCACTCCATGACTACAAGGGGCATGCAGACAATTTTGTTTGTTCCTTAATCCCTGGGTCCTCTTCTGCTGAATATACCCCAGGTGGACTATTGTTCAAAATGAGTGATAGCAACATGCAATATGTGACATCTACCTCTTTCTTACTGTTAGCATATGCCAAATACTTGACTTCTTCACATACAGTTGTTAACTGTGGTGGAACAACAGTAACACCAAACATGCTCAGAAGAATTGCCAAGAAACAGGTGGATTACTTGCTAGGAGATAACCCTTTGAAGATGTCCTACATGGTAGGGTATGGTCCAAGGTACCCTCAAAGGATACACCACAGAGGCTCATCTCTACCCTCCATTGCAGTTCACCCTGGGAAGATCCAATGTTCAGCAGGGTTCACTGTGATGAACTCACAATCCCCGAATCCTAACATTCTTGTAGGTGCTATTGTTGGTGGACCTGATCTTCATGATAGGTTCCCTGATCAACGGTCAGATTATGAACAATCTGAGCCAGCTACTTATATCAATGCACCACTTGTTGGAACACTAGCTTATCTTGCACACTCATTTGGTCAACTCTAG 1551 0.4358 MAFFVSSITTLFSLFTITCISIVTLPHCDAFPLHYNHHPLLHPHHHHPHIASHNYRDALTKSIMFFEGQRSGKLPPNQRMSWRRDSGLYDGSALHVDLVGGYYDAGDNVKFGFPMAFTITMLSWSVLEFGGLMRGELQNAREAIHWGTDYLLKATAYPNTIFVQVGDAKKDHACWERPEDMDTPRSVFKIDANNPGSEVAAETAAALAAASLVFRRSDPMYSKILARRAIKVFQFADKYRGSYSNALKPVVCPYYCSYSGYQDELLWGAAWLHKATKNPMYLNYIQVNGQILGAAEYDNTFGWDNKHVGARILLSKEFLVQKEQSLHDYKGHADNFVCSLIPGSSSAEYTPGGLLFKMSDSNMQYVTSTSFLLLAYAKYLTSSHTVVNCGGTTVTPNMLRRIAKKQVDYLLGDNPLKMSYMVGYGPRYPQRIHHRGSSLPSIAVHPGKIQCSAGFTVMNSQSPNPNILVGAIVGGPDLHDRFPDQRSDYEQSEPATYINAPLVGTLAYLAHSFGQL* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2664 516 Gene3D - 50 516 IPR012341 GO:0005975
Ahy12g2664 516 SUPERFAMILY Six-hairpin glycosidases 50 514 IPR008928 GO:0005975
Ahy12g2664 516 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 409 435 IPR018221 -
Ahy12g2664 516 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 482 500 IPR033126 -
Ahy12g2664 516 Pfam Glycosyl hydrolase family 9 55 506 IPR001701 GO:0004553|GO:0005975
Ahy12g2664 516 PANTHER ENDO-1,4-BETA-GLUCANASE 27 516 - -
Ahy12g2664 516 PANTHER ENDOGLUCANASE 17 27 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2664 Ahy-Chr12 116282446 116286406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2664 45 512 Glycoside Hydrolase AT1G02800 76.282 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2664 K01179 - gmx:100777718 888.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2664 12 116282446 116286406 Ahy12g2664 12 116282446 116286406 ECH
Ahy16g0652 16 12125784 12127957 Ahy12g2664 12 116282446 116286406 PCT
Ahy6g0662 6 8176214 8178405 Ahy12g2664 12 116282446 116286406 PCT
Ahy12g2664 12 116282446 116286406 Ahy16g0652 16 12125784 12127957 PCT
Ahy12g2664 12 116282446 116286406 Ahy6g0662 6 8176214 8178405 PCT