Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0632 ATGCGTCGCAACACCAACGGTCGATCGCCGCTGGTGAATCAACAGCGCCAAATCACTGCTTTCTTCTCCAAATCCACTTCTTCTTCTCCTTCTCCTTCTCCCATTCTCTCCGATTCCAAATCCATCAGCAACAATAAAACCTCTAAGTTAAACCCTAACCCTAACCTTACCTCTGCTAGCCCTACCCCTCCCACGCCTTCCCCTTCTAATCCCAAACCCATTCTTCTCGTCGGAGCTTCTTCTCCTCTATACTCCGATGACGTCATTGGAAAAAGGATCAAGGTTTATTGGCCTCTTGATAAAGCATGGTACGAAGGTACTGTCAAATCGTTCGATAATGCCACTTCTAAGCATTTAGTGTTATACGACGATGACGAAGAGGAATCCCTCGACCTTTCCAAGGAGAAGTTCGAATGGGTTCAGGATTCTTCATCGTCTGTCAAGAAGCTTAAACGGTTGCGTCGCAGCTGCGACATCCCCATTGTTAGGAAGATGGTGATTGACGACGACGAGAGTGATGGAAGTCCCAAAGGTGTTGATGATGGTAATTGCGGCAGTGATGATTCGGATGAAGATTGGGGGAAGAATGCGGTGGATGAAGGCGCTGAGGAGGAAGATGACGTGGAGCTAGACAATGAGGAAGATGACTATGAAGATGCTGCTGCAGAGAGGTCTAAAAGAAAGTCAAGTGCGAAGGTGGAGCCCAAGAAGCGGAAAATGAGTGGAACAGAGAAACCGGAGCCTGCAAAAAAGAGCAAGAACGTCGGGGAAGCTGGTGGTGTTAAGGGAGCTTTCAAGTTCTCAGTATTGGAGCCTTCAAGTACTTCGGATACTAAAAAGATATCCAATGGCGTTGACAATGTGGCAATTGATGATGCCTCTGAAAGATTTGCGACAAGGGATGCTCAGAAATTTCGCTTTCTCAGAGAAGACCGCAAGGATGCTAAACGAAGGCGTCCTACTGATGAAAATTATGATCCAAGAACTCTCTATTTGCCTCCTGATTTCTTAAGGAGTTTGTCAGATGGCCAGAAACAATGGTGGGAGTTCAAGTCAAAGCATATGGACAAAGTTTTATTTTTCAAGATGGGTAAATTTTATGAACTTTTTGAGATGGATGCACATGTAGGAGTGAAAGAGCTTGACTTGCAGTATATGAAGGGGGAACAACCTCATTGTGGTTTTCCGGAGAGGAATTTCTCAATGAATGTGGAGAAACTTGCTAGGAAGGGTTACCGAGTTCTTGTTATAGAGCAGACTGAAACACCTGTACAGTTAGAGCTTCGTCGCAAGAATGGCTCAAAAGATAAGGTTGTGAGACGGGAAATATGTGCAGTGGTTACAAAAGGCACACTAACTGATGGGGAGTTGCTGTCAGCAAACCCAGAAGCTGCGTATTTGATGGCACTGACAGAGCAACATGAAAACAACGCAAATGAAGTTTCAGAGCGCATTTATGGACTTTGTATAGTCGATGTTGCCACAAGCAGAATCATTCTTGGACAGTTTAAGGATGACTTGGAATGCAGTGCTTTATGCTGCATCTTGTCTGAGATTAGGCCAGTTGAAATTGTGAAACCTGCTGAAGTGCTCAGTGCTGAAACAGAGAGAGTACTGCTGAAGCATACTAGAAATCCTCTAGTGAATGAATTAGTTCCTAATGTGGAGTTTTGGGATGCTGAAAAAACCGTGGATCAATTGAAGAGAATTTACAGGCACACTGATGAAGTTAGTCTAGAAGATAATGAGCTAGGTTGCTTGCCAGATGTTTTGCTGGAGCTGGTGAAAACTGTCAATGACAATAAAAGTGCACTTTCAGCTCTTGGGGGTGCTCTATATTATCTGAAACAGGCTTTCTTAGATGAGGCATTGCTTAGATTTGCACACTTTGAGTTACTTCCATGTTCTGGCTTCTGTGATCTTGCCTCAAAACCATACATGGTTCTTGATGCAGCAGCCTTGGAGAATCTTGAAATTTTTGAGAATAGCAGAAATGGAGATTCTTCAGGTACTCTGTATTCCCAATTAAACCATTGTGTTACCGCATTTGGAAAGAGACTACTAAGGGCATGGCTTGCAAGACCATTATGTCATATAGAGTTAATTAAGGAACGCCAGGAAGCCATTACTAGTTTAAAGGGAGTTAATTTACCTTATGCACTAGAATTTCGAAAAGCTTTGTCAAGGTTACCTGACATGGAGCGATTGCTGGCCCGCATCTTCTCCACTAGTGAAGCTAATGGAAGGAATGCTAATAAAGTGGTTCTGTATGAGGATGCAGCAAAGAAACAACTACAAGAGTTTATTTCTGCTCTTCGTGGTTGTGAACTAATGTTGCAAGCATGCTCTTCTCTTGGCGTTATTCTGAATGATGTCAAATCTAGACTACTCCATCATCTGTTAACACCTGGAAAAGTTCTTCCTGATGTCTGCTTGGCTCTGAACCATTTCAAGGATGCCTTTGATTGGGTGGAAGCCAATAATTCAGGCCGTGTAATACCTCATGAAGGAGTTGACCCTGAGTATGACTCAGCCTGTAAGGCAGTTAAAGAAATTGAGTCCAGTTTATCAAAACATCTTATTGAACAAAGGAAATTGCTTGGAGACACATCTATCACTTATGTCACTGTTGGAAAGGACACATACCTTTTAGAAGTCCCAGAAAATTTGCGTGGGAAAGTTCCTCGGGACTATGAGCTGCGTTCATCTAAAAAAGGCTTCTTTAGGTACTGGACTCCTGCTATTAAAAAGTTCCTGGGAGAACTCTCCCAAGCTGAATCTGAAAAGGAGTCCTTATTGAAAAGTACATTGCAGAGATTAATTGGACGCTTTTGTGAAAATCATACTAAGTGGAGGCAATTGGTGTCTACTACAGCTGAGCTGGATGTTTTGATCAGTTTAGCTATTGCTCGTGATTACTATGAAGGGCCAACATGCAGACCAAGTTTTTTAAGCATGCTATCTACCAAAGACAGTCCTTACCTCTCTGCTAAAAGTTTGGGACACCCAGTCCTTAGGAGTGATTCCTTAGGAAAGGGGGCCTTTGTACCCAATGACATATCAATTGGTGGTCAACACGATGCCAACTTTATTCTTCTAACTGGTCCTAACATGGGTGGAAAGTCAACTCTCCTTCGCCAAGTTTGCTTGGCGGTGGTTTTGGCCCAGGTAGGGGCTGATGTCCCAGCAGAGAGTTTTGATTTGTCACCTGTGGACCGTATCTTTGTTCGCATGGGTGCCAAAGATAATATCATGGCTGGCCAGAGTACATTTTTAACTGAGCTTTCAGAAACTGCAACAATGCTGTCTTCAGCCACTCGTAATTCATTGGTGGCTCTTGATGAGCTTGGGCGTGGGACCTCAACTTCTGATGGGCAAGCCATTGCGGAATCTGTTCTAGAACATTTTGTGCGGAAGGTTCAGTGTCGTGGATTGTTTTCTACACATTATCATCGATTAGCTATCGATTATTACAAAGATCCCAAGGTCTCCCTCTGCCATATGGCATGCCAAGTTGGTAGTGGAACAATTGGCGTGGATGAAGTCACCTTTCTTTATAGGCTGACCCCTGGTGCATGTCCCAAGAGCTATGGTGTTAATGTTGCACGGTTGGCAGGGCTTCCAACTTCCGTGCTTCAGAAGGCTGCTGCTAAGTCCAAAGAATTTGAGGCCTCTTATGGTAAATCTAGAAATGCGTCTCTTGAAACAAACTCTCCAAATCAGGAATGGGTTGATGAGATGATAGTTGTAATGAAAATGTTGAACAAGGCTGCTGCAAATTTGAGTTATCAGGAAGGTGGTTGTGACAGCTCCCTCCATGAACTTAAGAGTAGAGCAAGAGAACTTATGCAGCGATGTTAA 3861 0.4359 MRRNTNGRSPLVNQQRQITAFFSKSTSSSPSPSPILSDSKSISNNKTSKLNPNPNLTSASPTPPTPSPSNPKPILLVGASSPLYSDDVIGKRIKVYWPLDKAWYEGTVKSFDNATSKHLVLYDDDEEESLDLSKEKFEWVQDSSSSVKKLKRLRRSCDIPIVRKMVIDDDESDGSPKGVDDGNCGSDDSDEDWGKNAVDEGAEEEDDVELDNEEDDYEDAAAERSKRKSSAKVEPKKRKMSGTEKPEPAKKSKNVGEAGGVKGAFKFSVLEPSSTSDTKKISNGVDNVAIDDASERFATRDAQKFRFLREDRKDAKRRRPTDENYDPRTLYLPPDFLRSLSDGQKQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGVKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVIEQTETPVQLELRRKNGSKDKVVRREICAVVTKGTLTDGELLSANPEAAYLMALTEQHENNANEVSERIYGLCIVDVATSRIILGQFKDDLECSALCCILSEIRPVEIVKPAEVLSAETERVLLKHTRNPLVNELVPNVEFWDAEKTVDQLKRIYRHTDEVSLEDNELGCLPDVLLELVKTVNDNKSALSALGGALYYLKQAFLDEALLRFAHFELLPCSGFCDLASKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLRAWLARPLCHIELIKERQEAITSLKGVNLPYALEFRKALSRLPDMERLLARIFSTSEANGRNANKVVLYEDAAKKQLQEFISALRGCELMLQACSSLGVILNDVKSRLLHHLLTPGKVLPDVCLALNHFKDAFDWVEANNSGRVIPHEGVDPEYDSACKAVKEIESSLSKHLIEQRKLLGDTSITYVTVGKDTYLLEVPENLRGKVPRDYELRSSKKGFFRYWTPAIKKFLGELSQAESEKESLLKSTLQRLIGRFCENHTKWRQLVSTTAELDVLISLAIARDYYEGPTCRPSFLSMLSTKDSPYLSAKSLGHPVLRSDSLGKGAFVPNDISIGGQHDANFILLTGPNMGGKSTLLRQVCLAVVLAQVGADVPAESFDLSPVDRIFVRMGAKDNIMAGQSTFLTELSETATMLSSATRNSLVALDELGRGTSTSDGQAIAESVLEHFVRKVQCRGLFSTHYHRLAIDYYKDPKVSLCHMACQVGSGTIGVDEVTFLYRLTPGACPKSYGVNVARLAGLPTSVLQKAAAKSKEFEASYGKSRNASLETNSPNQEWVDEMIVVMKMLNKAAANLSYQEGGCDSSLHELKSRARELMQRC* 1287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0632 1286 SMART TUDOR_7 85 143 IPR002999 -
Ahy6g0632 1286 SUPERFAMILY DNA repair protein MutS, domain I 329 451 IPR016151 GO:0005524|GO:0006298|GO:0030983
Ahy6g0632 1286 Coils Coil 915 935 - -
Ahy6g0632 1286 MobiDBLite consensus disorder prediction 1 77 - -
Ahy6g0632 1286 MobiDBLite consensus disorder prediction 1 56 - -
Ahy6g0632 1286 PANTHER DNA MISMATCH REPAIR PROTEIN MSH6 248 1237 - -
Ahy6g0632 1286 PANTHER DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER 248 1237 IPR045076 GO:0005524|GO:0006298|GO:0030983|GO:0140664
Ahy6g0632 1286 SUPERFAMILY DNA repair protein MutS, domain III 650 969 IPR036187 -
Ahy6g0632 1286 MobiDBLite consensus disorder prediction 219 252 - -
Ahy6g0632 1286 MobiDBLite consensus disorder prediction 164 258 - -
Ahy6g0632 1286 SMART DNAend 667 1008 IPR007696 GO:0005524|GO:0006298|GO:0030983
Ahy6g0632 1286 MobiDBLite consensus disorder prediction 197 218 - -
Ahy6g0632 1286 Gene3D DNA repair protein MutS, domain I 299 459 IPR016151 GO:0005524|GO:0006298|GO:0030983
Ahy6g0632 1286 Gene3D MutS, connector domain 464 644 IPR036678 GO:0005524|GO:0006298|GO:0030983
Ahy6g0632 1286 SUPERFAMILY DNA repair protein MutS, domain II 461 662 IPR036678 GO:0005524|GO:0006298|GO:0030983
Ahy6g0632 1286 Pfam MutS domain I 344 455 IPR007695 GO:0005524|GO:0006298|GO:0030983
Ahy6g0632 1286 Gene3D - 979 1256 IPR027417 -
Ahy6g0632 1286 MobiDBLite consensus disorder prediction 57 71 - -
Ahy6g0632 1286 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 990 1223 IPR027417 -
Ahy6g0632 1286 PIRSF Msh6 1 1275 IPR017261 GO:0006298|GO:0030983
Ahy6g0632 1286 Pfam MutS domain V 1032 1222 IPR000432 GO:0005524|GO:0006298|GO:0030983
Ahy6g0632 1286 SUPERFAMILY Tudor/PWWP/MBT 87 128 - -
Ahy6g0632 1286 Pfam MutS domain III 653 968 IPR007696 GO:0005524|GO:0006298|GO:0030983
Ahy6g0632 1286 Pfam MutS domain II 466 618 IPR007860 GO:0005524|GO:0006298|GO:0030983
Ahy6g0632 1286 Pfam MutS family domain IV 837 928 IPR007861 GO:0005524|GO:0006298|GO:0030983
Ahy6g0632 1286 SMART mutATP5 1028 1220 IPR000432 GO:0005524|GO:0006298|GO:0030983
Ahy6g0632 1286 Gene3D - 813 944 - -
Ahy6g0632 1286 Gene3D - 647 968 - -
Ahy6g0632 1286 Gene3D - 86 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0632 Ahy-Chr6 7720180 7727984 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0632 K08737 - gmx:100811104 1899.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0702 16 12889538 12897250 Ahy6g0632 6 7720180 7727984 hybridization