Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0702 CCCAAGCTTCTGAATACGCATGCTTCATACTTGATAGTTGATACTACATTACTTTGTCATTTTCTGTGTTTGTTCAACAACACCACTCTCTCACACACACATACACTGATCGCTAAGATGCGTCGCAACACCAACGGTCGATCGCCGCTGGTGAATCAACAGCGCCAAATCACTGCTTTCTTCTCCAAATCCACTTCTTCTTCTCCTTCTCCTTCTCCAATTCTCTCCGATTCCAAATCCATCAACAACGATAAAACCTCTAAGTTAAACCCTAACCCTAAACTTACCTCTGCGAGCCCTACCCCTCCCACGCCTTCCCCTTCTAATCCCAAACCCATTCTTCTCGTCGGAGCTTCTTCTCCTCTATACTCCGATGACGTCATTGGAAAAAGGATCAAGGTTTATTGGCCTCTTGATAAAGCATGGTACGAAGGTACGGTCAAATCGTTCGATAATGCCACTTCTAAGCATTTAGTGTTATACGACGATGACGAAGAGGAATCGCTCGACCTTTCCAAGGAGAAGTTCGAATGGGTTCAGGATTCTTCATCGTCTGTCAAGAAGCTTAAACGGTTGCGTCGCAGCTGCGACATCCCTGTTGTTAGGAAGATGGTGATTGACGACGATGAGAGTGATGGAAGTCCCAAAAGTGTTGATGATGGTAATTGTGGCAGTGATGATTCGGATGAAGATTGGGGGAAGAATGCGGTGGATGAAGGCGCTGAGGTGGAAGATGACGTGGAGCTAGACAACGAGGAAGATGACTATGAAGATGGTGCTGCAGAGAGGTCTAAAAGAAAGTCAAGTGCGAAGGTGGAGCCCAAGAAACGGAAAATGAGTGGAGCAGAGAAACCGGAGCCTGCAAAAAAGAGCAAGAACGCCGGGGAAGCTGGTGGTGTTAAGGGAGCTTTCAAGTTCTCAGTATTGGAGCCTACAAGTACTCCGGATACTAAAAAGATATCTAACGGCGTTGACAATGTGGCAAATGATGATGCCTCTGAAAGATTTGCGACAAGGGATGCTCAGAAATTTCGCTTTCTCAGAGAAGACCGCAGGGATGCTAAACGAAGGCGTCCTACTGATGAAAATTATGATCCAAGAACTCTCTATTTGCCTCCTGATTTCTTAAGGAGTTTGTCAGATGGCCAGAAACAATGGTGGGAGTTCAAGTCAAAGCATATGGACAAAGTTTTATTTTTCAAGATGGGTAAATTTTATGAACTTTTTGAGATGGATGCACATGTAGGAGTGAAAGAGCTTGACTTGCAGTATATGAAGGGGGAACAACCTCATTGTGGTTTTCCGGAGAGGAATTTCTCAATGAATGTGGAGAAACTTGCTAGGAAGGGTTACCGAGTTCTTGTTATAGAGCAGACTGAAACACCTGTACAGTTAGAGCTTCGTCGCAAGAATGGCTCAAAAGATAAGGTTGTGAGACGGGAAATATGTGCAGTGGTTACAAAAGGCACACTAACTGATGGGGAGTTGCTGTCAGCAAACCCAGAAGCTGCGTATTTGATGGCACTGACAGAGCAACATGAAAACAACGCAAATGAGGTTTCAGAGCGCATTTATGGAGTTTGTATAGTCGATGTTGCCACAAGCAGAATCATTCTTGGACAGTTTAAGGATGACTTGGAATGTAGTGCTTTATGCTGCATCTTGTCTGAGATTAGGCCAGTTGAAATTGTGAAACCTGCTGAAGTGCTCAGTGCTGAAACAGAGAAAGTACTGCTGAAGCATACTAGAAATCCTCTAGTGAATGAATTAGTTCCTAATGTGGAGTTTTGGGATGCTGAAAAAACCGTGGATCAATTGAAGAGAATTTACAGGCACACTGATGAAGTTAGTCTAGAAGATAATGAGCTAGGTTGCTTGCCAGATGTTTTGCTGGAGCTGGTGAAAACTGTCAATGACAATAATAGTGCACTTTCAGCTCTTGGGGGTGCTCTATATTATCTGAAACAGGCTTTCTTAGATGAGGCATTGCTTAGATTTGCACACTTTGAATTACTTCCATGTTCTGGCTTCGGTGATCTTGCCTCAAAACCATACATGGTTCTTGACGCAGCAGCCTTGGAGAATCTTGAAATCTTTGAGAATAGCAGAAATGGAGATTCTTCAGGCACTCTGTATTCCCAATTAAACCATTGTGTTACCGCATTTGGAAAGAGACTACTAAGGGCATGGCTTGCAAGACCATTATGTCATATAGAGTTAATTAAGGATCGCCAGGAAGCCATTGCTGGTTTAAAGGGAGTTAATTTACCTTATGCACTAGAATTTCGAAAAGCTTTGTCAAGGCTACCTGACATGGAGCGATTGCTGGCCCGCATCTTCTCCACTAGTGAAGCTAATGGAAGGAATGCTAATAAAGTGGTTCTGTATGAGGATGCAGCAAAGAAACAACTACAAGAGTTTATTTCTGCTCTTCGTGGTTGTGAACTAATGTTGCAAGCATGCTCTTCTCTTGGCGTTATTCTGAATGATGTCAAATCTAGACTACTCCATCATCTGTTAACACCTGGAAAAGAACTTCCTGATGTCTGCTTGGCTCTGAACCATTTCAAGGATGCCTTTGATTGGGTGGAAGCCAATAACTCAGGCCGTGTAATACCTCATGAAGGAGTTGACCCTGAGTATGACTCAGCCTGTAAGGCAGTTAAAGAAATTGAGTCCAGTTTATCAAAACATCTTATTGAACAAAGGAAATTGCTTGGAGACACATCTATCACTTATGTCACTGTTGGAAAGGACACATACCTTTTAGAAGTCCCAGAAAATTTGCGTGGGAAAGTTCCTCGGGACTATGAGCTGCGTTCATCTAAAAAAGGCTTCTTTAGGTACTGGACTCCTGCTATTAAAAAGTTCCTGGGAGAACTCTCCCAAGCTGAATCTGAAAAGGAGTCCTTATTGAAAAGTACATTGCAGAGATTAATTGGACGCTTTTGTGAAAATCATACTAAGTGGAGGCAATTGGTGTCTACTACAGCTGAGTTGGATGTTTTGATCAGTTTAGCTATTGCTCGTGATTACTATGAAGGGCCAACATGCAGACCAAGTTTTTTAGGCATGCTATCTACCAAAGACAGTCCTTACCTCTCTGCTAAAAGTTTGGGACACCCAGTCCTTAGGAGTGATTCCTTAGGAAAGGGGGCCTTTGTACCCAATGACATATCAATTGGTGGTCAACACGATGCCAACTTTATTCTTCTAACTGGTCCTAACATGGGTGGAAAGTCAACTCTCCTTCGCCAAGTTTGCTTGGCAGTGGTTTTGGCCCAGGTAGGGGCTGATGTCCCAGCAGAGAGTTTTGATTTGTCACCTGTGGACCGTATCTTTGTTCGCATGGGTGCCAAAGATAATATCATGGCTGGCCAGAGTACATTTTTAACTGAGCTTTCAGAAACTGCAACAATGCTGTCTTCAGCCACTCGTAATTCATTGGTGGCTCTTGATGAGCTTGGGCGTGGGACCTCAACTTCTGATGGGCAAGCCATTGCGGAATCTGTTCTAGAACATTTTGTGCGGAAGGTTCAGTGTCGTGGATTGTTTTCTACACATTATCATCGATTAGCTATCGATTATTACAAAGATCCCAAGGTCTCCCTCTGCCATATGGCATGCCAAGTTGGTAGTGGAACAATTGGCGTGGATGAAGTCACCTTTCTTTATAGGCTGACCCCTGGTGCATGTCCCAAGAGTTATGGTGTTAATGTTGCACGGTTGGCAGGGCTTCCAACTTCCGTGCTTCAGAAGGCTGCTGCTAAGTCTAAAGAATTTGAGGCCTCTTATGGTAAATCTAGAAATGCGTCTCTTGAAACAAACTCTCCAAATCAGGAATGGGTTGATGAGATGATAGTTGTAATGAAAATGTTGAACAAGGCTGCTGCAAATTTGAGTTATCAGGAAGGTGGTTGTGACAGCTCCCTCCATGAACTTAAGAGTAGAGCAAGAGAACTTATGCAGCGATGTTAA 3978 0.4356 PKLLNTHASYLIVDTTLLCHFLCLFNNTTLSHTHTLIAKMRRNTNGRSPLVNQQRQITAFFSKSTSSSPSPSPILSDSKSINNDKTSKLNPNPKLTSASPTPPTPSPSNPKPILLVGASSPLYSDDVIGKRIKVYWPLDKAWYEGTVKSFDNATSKHLVLYDDDEEESLDLSKEKFEWVQDSSSSVKKLKRLRRSCDIPVVRKMVIDDDESDGSPKSVDDGNCGSDDSDEDWGKNAVDEGAEVEDDVELDNEEDDYEDGAAERSKRKSSAKVEPKKRKMSGAEKPEPAKKSKNAGEAGGVKGAFKFSVLEPTSTPDTKKISNGVDNVANDDASERFATRDAQKFRFLREDRRDAKRRRPTDENYDPRTLYLPPDFLRSLSDGQKQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGVKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVIEQTETPVQLELRRKNGSKDKVVRREICAVVTKGTLTDGELLSANPEAAYLMALTEQHENNANEVSERIYGVCIVDVATSRIILGQFKDDLECSALCCILSEIRPVEIVKPAEVLSAETEKVLLKHTRNPLVNELVPNVEFWDAEKTVDQLKRIYRHTDEVSLEDNELGCLPDVLLELVKTVNDNNSALSALGGALYYLKQAFLDEALLRFAHFELLPCSGFGDLASKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLRAWLARPLCHIELIKDRQEAIAGLKGVNLPYALEFRKALSRLPDMERLLARIFSTSEANGRNANKVVLYEDAAKKQLQEFISALRGCELMLQACSSLGVILNDVKSRLLHHLLTPGKELPDVCLALNHFKDAFDWVEANNSGRVIPHEGVDPEYDSACKAVKEIESSLSKHLIEQRKLLGDTSITYVTVGKDTYLLEVPENLRGKVPRDYELRSSKKGFFRYWTPAIKKFLGELSQAESEKESLLKSTLQRLIGRFCENHTKWRQLVSTTAELDVLISLAIARDYYEGPTCRPSFLGMLSTKDSPYLSAKSLGHPVLRSDSLGKGAFVPNDISIGGQHDANFILLTGPNMGGKSTLLRQVCLAVVLAQVGADVPAESFDLSPVDRIFVRMGAKDNIMAGQSTFLTELSETATMLSSATRNSLVALDELGRGTSTSDGQAIAESVLEHFVRKVQCRGLFSTHYHRLAIDYYKDPKVSLCHMACQVGSGTIGVDEVTFLYRLTPGACPKSYGVNVARLAGLPTSVLQKAAAKSKEFEASYGKSRNASLETNSPNQEWVDEMIVVMKMLNKAAANLSYQEGGCDSSLHELKSRARELMQRC* 1326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0702 1325 Gene3D - 686 1007 - -
Ahy16g0702 1325 MobiDBLite consensus disorder prediction 241 257 - -
Ahy16g0702 1325 Pfam MutS domain II 505 657 IPR007860 GO:0005524|GO:0006298|GO:0030983
Ahy16g0702 1325 MobiDBLite consensus disorder prediction 61 95 - -
Ahy16g0702 1325 MobiDBLite consensus disorder prediction 205 297 - -
Ahy16g0702 1325 PIRSF Msh6 26 1314 IPR017261 GO:0006298|GO:0030983
Ahy16g0702 1325 MobiDBLite consensus disorder prediction 96 110 - -
Ahy16g0702 1325 Pfam MutS family domain IV 876 967 IPR007861 GO:0005524|GO:0006298|GO:0030983
Ahy16g0702 1325 Pfam MutS domain V 1071 1261 IPR000432 GO:0005524|GO:0006298|GO:0030983
Ahy16g0702 1325 MobiDBLite consensus disorder prediction 258 291 - -
Ahy16g0702 1325 PANTHER DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER 289 1276 IPR045076 GO:0005524|GO:0006298|GO:0030983|GO:0140664
Ahy16g0702 1325 SMART TUDOR_7 124 182 IPR002999 -
Ahy16g0702 1325 PANTHER DNA MISMATCH REPAIR PROTEIN MSH6 289 1276 - -
Ahy16g0702 1325 Gene3D - 1018 1295 IPR027417 -
Ahy16g0702 1325 MobiDBLite consensus disorder prediction 61 113 - -
Ahy16g0702 1325 SMART DNAend 706 1047 IPR007696 GO:0005524|GO:0006298|GO:0030983
Ahy16g0702 1325 Gene3D - 852 983 - -
Ahy16g0702 1325 SUPERFAMILY Tudor/PWWP/MBT 126 167 - -
Ahy16g0702 1325 SMART mutATP5 1067 1259 IPR000432 GO:0005524|GO:0006298|GO:0030983
Ahy16g0702 1325 SUPERFAMILY DNA repair protein MutS, domain I 368 490 IPR016151 GO:0005524|GO:0006298|GO:0030983
Ahy16g0702 1325 Coils Coil 954 974 - -
Ahy16g0702 1325 Gene3D - 125 175 - -
Ahy16g0702 1325 Gene3D MutS, connector domain 503 680 IPR036678 GO:0005524|GO:0006298|GO:0030983
Ahy16g0702 1325 SUPERFAMILY DNA repair protein MutS, domain III 689 1008 IPR036187 -
Ahy16g0702 1325 Pfam MutS domain I 383 494 IPR007695 GO:0005524|GO:0006298|GO:0030983
Ahy16g0702 1325 SUPERFAMILY DNA repair protein MutS, domain II 500 701 IPR036678 GO:0005524|GO:0006298|GO:0030983
Ahy16g0702 1325 Gene3D DNA repair protein MutS, domain I 338 498 IPR016151 GO:0005524|GO:0006298|GO:0030983
Ahy16g0702 1325 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1030 1262 IPR027417 -
Ahy16g0702 1325 Pfam MutS domain III 692 1007 IPR007696 GO:0005524|GO:0006298|GO:0030983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0702 Ahy-Chr16 12889538 12897250 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0702 K08737 - gmx:100811104 1907.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0702 16 12889538 12897250 Ahy16g0702 16 12889538 12897250 ECH
Ahy16g0702 16 12889538 12897250 Ahy6g0632 6 7720180 7727984 hybridization