Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0628 ATGATGGGGAGCGATGGCGACGGTGATGCACCATTATTGGACGATAAAGCAAAGCGAATGAGGGATCTGCTATCCAGTTTTTACGCTCCAAACCCCTCAATGTTGTCTCATTCCCCCACCGCCTCCTCCAAGCATTCAACACCCGACGATATCAACTCCTCCTCCTTCGATCCCAACCATTACATGAACATTCTCGTCAATAACTCCAACTTGGAAGGCCTTCTCAAGCGCCACGTTGATATGGCCGCTGAGATCAAGAATCTCGACACCGACTTGCAGATGCTTGTTTACGAGAATTACAACAAGTTCATCAGCGCCACTGATACTATCAAGAGGATGAAAAGTAATATTTTGGGGATGGAGGGAAATATGGAGTACCTTCTTGAAAAAATCATGTCTGTACAGTCCAGGAGTGACAGTGTTAACACTTCTTTATTTGAGAAGAGGGAGCACATTGAGAAATTGCATCGCACTTGTAATCTTCTTCGAAAAGTTCAGTTCATATATGATCTACCTGATAGACTTGGCAAGTGCATCAAATCAGAAGCCTATGCGGATGCTGTCAGATTCTACACTGGTGCAATGCCAATTTTTAAGGCATATGGAGACTCTTCATTCCATGATTGTAAGCGAGCATCCGATGAAGCAATAGCTATCATAGTTAAAAACTTGCAGGAAAAGCTGTTTTCAGATTCTGAACCTATACAAGTGAGAGCTGAGGCTGCATTGCTGCTTAAGCAGTTGGATTTTCCGGTGGACAATTTGAAGACAAAGCTGTTAGAGAGGTTGGAACATTCCCTTAGAGACATTCAACTGAAACCTGAAGAGATAAAGAATGCTTCACCCTCTGCACGTGAGGTAGCTATTCTCGAATTTGTGGAGGCTATTCATGCATTTCGAGTAATTTTCCCAGATTCAGAAACTCAATTAGTTAAAATTGCTAAAGGCTTGATTACCAGGGACTTTGTAATTACCGAGGAGTATGTAACGACTAGAATTTGTGCGGCAGATCTACTAGGCGTTCTTCGAGTTATTTGGAATGAATCACTCCTGATGGACGAGGTCTTGCAGGATTCAGCTCTATCTGATCATTTTCTTGAGGGTGCTAAGGCTGCTGTCAAGCTATATGTGGAAAGTGCATTTTCTCAACTTTTGCTAGATATCTCAGATTGCCTCTTAAAAATTTTGAAACGAGATGAAACAGAAGAGTACTCCCTGGAAACTGCTCTAGATGCTAGCACAAAACTTGCTCTCCAAGGAGGCAGGAACCTCTTGCTGGATGTTTGCAAGATTCTAGATGATGACTCAGGGATTATAGATAAACTAAGAGAGCCAATAATTGATTGGGTACAAGAAGGGTTACAAGATTTTTTCAGGCAACTTGAGGATCAGTTCCAATCGTTTTCAGGGAAGAATAATTCTTCAGCTACACAAATTCATGGGCTGACAGAGGCAGCTGCTTTTGCTGGCCTTGTCCTAGTGCTGGCTCAATTGTCTGCTTTCATTGAACAAACTGCCATCCCTAAGATCAACGAGGAATTAGCAGTTTCTTTTTCTGCTGGTCCATATGAATATGGACCCGCCTTTGTTCCGGGAGAGATCTCTCGAAAATTTAGATCAGCTGGTGACAAGTTCCTACAGCAGTACATAAATATTCGAACTCAACGAATATCACTACTCCAGAAGAAGAGATTTGCCACACCTAAATGGGTTAAGCATAAGGAGCCAAGAGAAGTTCATATGTTTGTTGATCTATTTCTACAAGAGCTCAAGGTCATAGTCAATGAAGTGAAGCAGGTTTTGCCTCAAGATATGCGAAAGCATCGTAGAAGTAACGCAAGCAGTGCTTCGTCGAAAAGTAATTCCTTCCGAGAGGAGAAATTATTGCACCGCTCAAATACTCAAAGGGCGAGGAGCCAGCTTCTGGAAACACATTTAGCCAAACTGTTTAAGCAAAAAGTTGAAATTTTCACAAAAGTAGAACACACCCAGGAATCAGTTGTAATGACCATAGTTAAATTATCCCTTAAAAGTTTACAAGAATTTGTAAGGCTTCAGACTTTTAACCGGAGTGGATTTCAGCAAATTCAATTGGATATGCAGTTCCTAAGGACTCCTTTAAGGGAAATAGTTGAAGATGAAGCTGCAATGGATTTCTTGCTTGATGAGGTGATTGTTGCTGCTACAGAGAGGTGCCTTGATCCAATTCCATTGGAGTCCCCCATTCTGGACAAACTAATTCAAGCAAAGCTGGCAAAATCTTTGGAGGAGAACACATCCTCTTCATAA 2289 0.4181 MMGSDGDGDAPLLDDKAKRMRDLLSSFYAPNPSMLSHSPTASSKHSTPDDINSSSFDPNHYMNILVNNSNLEGLLKRHVDMAAEIKNLDTDLQMLVYENYNKFISATDTIKRMKSNILGMEGNMEYLLEKIMSVQSRSDSVNTSLFEKREHIEKLHRTCNLLRKVQFIYDLPDRLGKCIKSEAYADAVRFYTGAMPIFKAYGDSSFHDCKRASDEAIAIIVKNLQEKLFSDSEPIQVRAEAALLLKQLDFPVDNLKTKLLERLEHSLRDIQLKPEEIKNASPSAREVAILEFVEAIHAFRVIFPDSETQLVKIAKGLITRDFVITEEYVTTRICAADLLGVLRVIWNESLLMDEVLQDSALSDHFLEGAKAAVKLYVESAFSQLLLDISDCLLKILKRDETEEYSLETALDASTKLALQGGRNLLLDVCKILDDDSGIIDKLREPIIDWVQEGLQDFFRQLEDQFQSFSGKNNSSATQIHGLTEAAAFAGLVLVLAQLSAFIEQTAIPKINEELAVSFSAGPYEYGPAFVPGEISRKFRSAGDKFLQQYINIRTQRISLLQKKRFATPKWVKHKEPREVHMFVDLFLQELKVIVNEVKQVLPQDMRKHRRSNASSASSKSNSFREEKLLHRSNTQRARSQLLETHLAKLFKQKVEIFTKVEHTQESVVMTIVKLSLKSLQEFVRLQTFNRSGFQQIQLDMQFLRTPLREIVEDEAAMDFLLDEVIVAATERCLDPIPLESPILDKLIQAKLAKSLEENTSSS* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0628 762 PANTHER UNCHARACTERIZED 10 723 IPR014812 -
Ahy6g0628 762 MobiDBLite consensus disorder prediction 34 53 - -
Ahy6g0628 762 MobiDBLite consensus disorder prediction 604 632 - -
Ahy6g0628 762 PANTHER LOW QUALITY PROTEIN: VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 51 HOMOLOG 10 723 - -
Ahy6g0628 762 Pfam Vps51/Vps67 51 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0628 Ahy-Chr6 7690890 7696592 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0628 K20296 - gmx:100818891 1083.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0705 16 12927219 12932780 Ahy6g0628 6 7690890 7696592 hybridization
Ahy6g0628 6 7690890 7696592 Ahy19g1177 19 22007042 22017652 PCT
Ahy6g0628 6 7690890 7696592 Ahy9g0915 9 16758676 16769229 PCT
Ahy19g1177 19 22007042 22017652 Ahy6g0628 6 7690890 7696592 PCT
Ahy9g0915 9 16758676 16769229 Ahy6g0628 6 7690890 7696592 PCT