Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1177 ATGATGGTTGCAGATGAAGTGCCACTGGACGACAAAGCAAAGCGGATGAGAGATCTGCTATCGAGTTTCTACTCTCCAGAGTCTGCCATGTCCACCGGCACCGACTCCGCCAAGCACGCCTCACCCGACGATATCAACTCCAACTCCTTCGATCCCGATCACTACATGAACCTCATGGTTCACAAGTCCAATTTGGAAGGGCTGCTTCAGCGCCACGTCGAGATGGCTGCTGAAATCAAGAATCTTGACACTGACTTGCAAATGCTGGTTTACGAGAACTATAACAAGTTCATCAGTGCTACTGATACTATAAAGAGGATGAAAAGTAACATTTCCGGGATGGAGACAAACATGGAGCAGCTTCTTGAGAAGATAATGTCTGTGCAGTCAAGGAGTGACAGCGTTAACACTTCTCTTTTTGACAAAAGGGAGCACATAGAGAAGCTGCATCGTACTTGCAATCTTCTCCGTAAAGTTCAGTTCATATATGATCTGCCTGATAGACTTAACAAGTGCATCAAATCGGAAGCTTATGCAGATGCAGTTAGGTTTTACACTGGAGCAATGCCAATTTTAATGGCATATGGAGATTCATCTTTCCGGGATTGCAAGCTAGCCTCTGAGGAAGCAATGGCTACAATAGTAAAAAACTTGCAGGGGAAGCTATTTTCAGATTCTGAATCAATACAAAAGAGAGCTGAAGCTGCAGTGCTCCTTAAGCAGTTGGAATATCCGGTGGACAATTTGAAGGCCAAGTTACTTGAGAAGTTAGATCAATCTCTAAAAGACATTCAACTAAAGCCTGAAGAAATAAAAGATGTATCAGTAGACCTTACTCCTTCTGATTCTGCTCATGAGGCAAGCATTAATGAATTTGTGGAAGCAGTTCGTGCTTTTCGAGTAATATTTCCTGATTCAGAAGAGCAGTTGGTTACACTTGCTAAAGACCTGGTTACCAAGAATTTTGCCATTGCTGAGGAATATGTTCAGACACGAGTTTGTGCAGCAGATCTACTTGGTGTTCTTCGAGTTATTTGGAATGACGTACTCTTGCTAGACGAAGTCTTACAAGAAGCGGCTCTCTCTAACCATTCTCTTGAGGCTGCGAAGGCTGTGGTCATGTCTTATATTAAAAGTGCATTTTCACATCTTTTGCAAGATATCTCAGATTCATTGTTGAAAGTCCTGAAAAAGGATGGAATGGGGGAGTACTCTCTGGAGGTTGCTCTTGATGCTAGTACAAAAGCTGTTCTCCAAGGAGGCATGAATATCTTGCAGGAATTTCGCAAATTGCTAGATCACAACTCTGGGATCCTAGTCAGACTAAGAGAGTTAACCATTGATTTTGTTCAAGAAGGAATTCAAGATTTTTTTAGGCAACTTGAGGATCACTTCCTTCGCTTTTCAGGAAGAAATAATTCTTCAGCTTTTAAAGATCATGGTCTTGTTGAGGGAGCTCAAGGTGATAAAGCTTTTGCTGGTCTTGTCCTAGTGCTGGCACAATTGTCTGCTTTTATTGAACAGACTGTCATCCCAAAAATCACTGAGGAAATAGCTACTTCCTTTACTGGTGGTAGTGTTAGAGGCTATGAATATGGACCTGCCTTTGTTCCCGGAGAAATCTGCCGGAAATTTCGATCAGCTGGCGAAAAATTCCTGCACCTGTATGTAAATGTGAGAACTCAGAGGATATCATTTCTCCTAAAGAAGAGGTTTTCCACTCCAAACTGGGTCAAGCATAAGGAGCCAAGGGAAGTTCATATGTTTGTTGATTTATTTCTTCAAGAGCTTGAAGCTATAGGTACTGAAGTGAAGCAGACCTTGCCTCAAGGTAAGCGTAAGCACAGAAGGACTGATAGTAATGGAAGTACTGCTTCATCAAGGCGTAACCCCTTACGAGAGGAGAAATTGAATAGATCAAATACTCAAAAGGCAAGGAGCCAGCTTTTGGAAACACATCTAGCGAAACTATTCAAGCAAAAAGTTGAAATCTTCACAAAAGTAGAATATACACAGGAATCTGTTGTTACAACCATAGTTAAATTGTCCCTTAAAAGTCTACAAGAATTTGTCCGGCTCCAGACCTTTAACCGGAGTGGATTCCAGCAAGTTCAATTGGATATTCAATTCCTGAGGATCCCTTTAAGGGAAATTGTTGAAGATGAAGCTGCAATTGACTTCTTGCTTGATGAGGTGATTGTTGCTACTGCAGAGCGGTGTCTTGATCCAATTCCATTAGAGCCTCCCATACTTGACAAACTTATACAAGCGAAGTTGGCCAAATCCAAGGAGCAAAATGCAATCCCTTCCTAA 2313 0.4189 MMVADEVPLDDKAKRMRDLLSSFYSPESAMSTGTDSAKHASPDDINSNSFDPDHYMNLMVHKSNLEGLLQRHVEMAAEIKNLDTDLQMLVYENYNKFISATDTIKRMKSNISGMETNMEQLLEKIMSVQSRSDSVNTSLFDKREHIEKLHRTCNLLRKVQFIYDLPDRLNKCIKSEAYADAVRFYTGAMPILMAYGDSSFRDCKLASEEAMATIVKNLQGKLFSDSESIQKRAEAAVLLKQLEYPVDNLKAKLLEKLDQSLKDIQLKPEEIKDVSVDLTPSDSAHEASINEFVEAVRAFRVIFPDSEEQLVTLAKDLVTKNFAIAEEYVQTRVCAADLLGVLRVIWNDVLLLDEVLQEAALSNHSLEAAKAVVMSYIKSAFSHLLQDISDSLLKVLKKDGMGEYSLEVALDASTKAVLQGGMNILQEFRKLLDHNSGILVRLRELTIDFVQEGIQDFFRQLEDHFLRFSGRNNSSAFKDHGLVEGAQGDKAFAGLVLVLAQLSAFIEQTVIPKITEEIATSFTGGSVRGYEYGPAFVPGEICRKFRSAGEKFLHLYVNVRTQRISFLLKKRFSTPNWVKHKEPREVHMFVDLFLQELEAIGTEVKQTLPQGKRKHRRTDSNGSTASSRRNPLREEKLNRSNTQKARSQLLETHLAKLFKQKVEIFTKVEYTQESVVTTIVKLSLKSLQEFVRLQTFNRSGFQQVQLDIQFLRIPLREIVEDEAAIDFLLDEVIVATAERCLDPIPLEPPILDKLIQAKLAKSKEQNAIPS* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1177 770 Pfam Vps51/Vps67 45 130 - -
Ahy19g1177 770 PANTHER UNCHARACTERIZED 2 731 IPR014812 -
Ahy19g1177 770 MobiDBLite consensus disorder prediction 605 644 - -
Ahy19g1177 770 Coils Coil 104 131 - -
Ahy19g1177 770 PANTHER LOW QUALITY PROTEIN: VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 51 HOMOLOG 2 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1177 Ahy-Chr19 22007042 22017652 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1177 K20296 - gmx:100818891 1228.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1177 19 22007042 22017652 Ahy19g1177 19 22007042 22017652 ECH
Ahy19g1177 19 22007042 22017652 Ahy9g0915 9 16758676 16769229 hybridization
Ahy16g0705 16 12927219 12932780 Ahy19g1177 19 22007042 22017652 PCT
Ahy6g0628 6 7690890 7696592 Ahy19g1177 19 22007042 22017652 PCT
Ahy19g1177 19 22007042 22017652 Ahy16g0705 16 12927219 12932780 PCT
Ahy19g1177 19 22007042 22017652 Ahy6g0628 6 7690890 7696592 PCT