Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0600 ATGGCAAATAGAGCTGATCCTGATATTGACGACGATTTGCGTGATCTTTACAAGGAGTACACTGGTCCTCTGGGATCTGCTCCTACCAATACGCAAGATAGGGAAAAATCAAACAAAAGGTCTCATGCTGGTTCAGATGAAGAGGAGGAGCCACGGGACCCTAATGCTGTTCCAACCGATTTCACCAGCCGAGAGGCTAAGGTTTGGGAGGCTAAGTCAAAGGCTACTGAGAGGAATTGGAAGAAAAGGAAAGAAGAGGAAATGATCTGCAAACTTTGTGGAGAATCAGGGCATTTCACTCAGGGTTGTCCGACTACTCTTGGAGCAAACCGCAAGTCTCAAGATTTCTTTGAAAGGATACCCGCAAGGGATAAAAATGTAAGAGCGCTTTTCACAGAGAAAGTTCTAAACAAGATTGAAAGGGATATTGGCTGCAAAATTAAGATGGATGAGAAATTTATTATTGTCAGTGGTAAGGATAGATTAATTTTGGCAAAAGGTGTTGATGCGGTGCACAAGATTAGAGAGGAGGGTGAACAAAGAGGAACTTCTAGTTCTCACATGGCCAGGTCAAGGTCTCCTGAGCAAAGTCCTGTTGGTGCTCGGTTTCAACGATCTGAGCCCCAGAGGTCTCATTCTGGACCGCGAAATGCATCTCAGTTTCAACAAAGGTTTGGTAGGCAAGAGAGAGCTGTTGAAGACCGCGTGCGAGAGGACATGCAAAAGTTTGCAAGAGGTTCTCCACAAGCTTATGGTAATAGTGGAGCAAGAGGTCGGTCAAGCCATTCAAGATCACCAAGACAGCCCCCTTACACAGGGAACTCATATAATTCAATTGATGGCCGCAATCAGAACATAGGATCTTATAGGAATGATGGGTGGGATTCTCACAGAAGAGAATCTGCAGGGATCCAACCCAGTCATCAGTTTGATTATAGCACTTCCCCCAAGACTTTAGAAGAATTAGAGTTGGAGTATAAGAAAGAGGCAACTGAGCTAATGAAAAACCGTGACAGGGAAGAAGATGAAGAAAATTTCAAGCATCGTGAGGCTGTTCGAGACTTGAGGGAGAACTACATGAACAAAGTTGCTATGTTAAGGGTCTCACATGCTAAACAATGGGAAGAGTTTCTTCAGCTTGAAGCCCAGAGGCATCAACAGCACACAATCCAACAAATCCCTTCTGGTTTTGGCAGTTATAAGCAGCAGAATTTCACCGAATATGATGGTTCCGCTGTCAATCCTCACTATGCTGGGCCCAACTTACCCTTGGAATCGAGGAACAGGTTCTCAGACATGGAGACTTATCCTACCAGGCCTCACGATAATTTTGGTGATTTTCAGAGGCGTGGTGGAGATTTTGCAAAAGCTTACAACAGATATTAA 1386 0.4444 MANRADPDIDDDLRDLYKEYTGPLGSAPTNTQDREKSNKRSHAGSDEEEEPRDPNAVPTDFTSREAKVWEAKSKATERNWKKRKEEEMICKLCGESGHFTQGCPTTLGANRKSQDFFERIPARDKNVRALFTEKVLNKIERDIGCKIKMDEKFIIVSGKDRLILAKGVDAVHKIREEGEQRGTSSSHMARSRSPEQSPVGARFQRSEPQRSHSGPRNASQFQQRFGRQERAVEDRVREDMQKFARGSPQAYGNSGARGRSSHSRSPRQPPYTGNSYNSIDGRNQNIGSYRNDGWDSHRRESAGIQPSHQFDYSTSPKTLEELELEYKKEATELMKNRDREEDEENFKHREAVRDLRENYMNKVAMLRVSHAKQWEEFLQLEAQRHQQHTIQQIPSGFGSYKQQNFTEYDGSAVNPHYAGPNLPLESRNRFSDMETYPTRPHDNFGDFQRRGGDFAKAYNRY* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0600 461 MobiDBLite consensus disorder prediction 176 316 - -
Ahy6g0600 461 SUPERFAMILY Retrovirus zinc finger-like domains 77 109 IPR036875 GO:0003676|GO:0008270
Ahy6g0600 461 PANTHER OS01G0252900 PROTEIN 1 461 - -
Ahy6g0600 461 MobiDBLite consensus disorder prediction 227 242 - -
Ahy6g0600 461 PANTHER OS01G0252900 PROTEIN 1 461 - -
Ahy6g0600 461 Coils Coil 319 343 - -
Ahy6g0600 461 MobiDBLite consensus disorder prediction 253 291 - -
Ahy6g0600 461 ProSiteProfiles Zinc finger CCHC-type profile. 90 104 IPR001878 GO:0003676|GO:0008270
Ahy6g0600 461 MobiDBLite consensus disorder prediction 1 69 - -
Ahy6g0600 461 MobiDBLite consensus disorder prediction 184 226 - -
Ahy6g0600 461 MobiDBLite consensus disorder prediction 33 55 - -
Ahy6g0600 461 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0600 Ahy-Chr6 7412204 7416021 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0600 - - gmx:100806099 769.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0737 16 13400612 13404342 Ahy6g0600 6 7412204 7416021 hybridization