Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0737 ATGGCAAATAGAGCTGATCCTGATATTGACGACGATTTGCGTGATCTTTACAAGGAGTACACTGGTCCTCTGGGATCTGCTCCTACCAATACGCAAGATAGGGAAAAATCAAACAAAAGGTCTCATGCTGGTTCAGATGAAGAGGAGGAGCCACGGGACCCTAATGCTGTTCCAACCGATTTCACCAGCCGAGAGGCTAAGGTTTGGGAGGCTAAGTCAAAGGCTACTGAGAGGAATTGGAAGAAAAGGAAAGAAGAGGAAATGATCTGCAAACTTTGTGGAGAATCAGGGCATTTCACTCAGGGTTGTCCGACTACTCTTGGAGCAAACCGCAAGTCTCAAGATTTCTTTGAAAGGATACCCGCAAGGGATAAAAATGTAAGAGCGCTTTTCACAGAGAAAGTTCTAAACAAGATTGAAAGGGAAATTGGCTGCAAAATTAAGATGGATGAGAAATTTATTATTGTCAGTGGTAAGGATAGATTAATTTTGGCAAAAGGTGTTGATGCGGTACACAAGATTAGAGAGGAGGGTGAACAAAGAGGAACTTCTAGTTCTCACATGGCCAGGTCAAGGTCTCCTGAGCAAAGTCCTGTTGGTGCTCGGTTTCAACGATCTGAGCCCCAGAGGTCTCATTCTGGACCGCGAAATGCATCTCAGTTTCAACAAAGGTTTGGTAGGCAAGAGAGAGCTGTTGAAGACCGCGTGCGAGAGGACATGCAAAAGTTTGCAAGAGGTTCTCCACAAGCAAGAGCTTATGGTAATAGTGGAGCAAGAGGTCGGTCAAGCCATTCAAGATCTCCAAGACAGCCCCCTTACACAGGGAACTCATATAATTCAATTGATGGCCGCAATCAGAACATAGGATCTTATAGGAATGATGGGTGGGATTCTCACAGAAGAGAATCTGCAGGGATCCAACCCAGTCATCAGTTTGATTATAGCACTTCCCCCAAGACTTTAGAAGAATTAGAGTTGGAGTATAAGAAAGAGGCAACTGAGCTAATGAAAAACCGTGACAGGGAAGAAGATGAAGAAAATTTCAAGCATCGTGAGGCTGTTCGAGACTTGAGGGAGAACTACATGAACAAAGTTGCTATGTTAAGGGTCTCACATGCTAAACAATGGGAAGAGTTTCTTCAGCTTGAAGCCCACAGGCATCAACAGCACACAATCCAACAAATCCCTTCTGGTTTTGGCAGTTATAAGCAGCAGAATTTCACCGAATATGATGGTTCTGCTGTCAATCCTCACTATGCTGGGCCCAACTTACCCTTGGAATCGAGGAACAGGTTCTCAGACATGGAGAATTATCCTACCAGGCCTCATGATAATTTTGGTGAATTTCAGAGGCGTGGTGGAGATTTTGCAAAAGCTTTCAACAGATATTAA 1392 0.4418 MANRADPDIDDDLRDLYKEYTGPLGSAPTNTQDREKSNKRSHAGSDEEEEPRDPNAVPTDFTSREAKVWEAKSKATERNWKKRKEEEMICKLCGESGHFTQGCPTTLGANRKSQDFFERIPARDKNVRALFTEKVLNKIEREIGCKIKMDEKFIIVSGKDRLILAKGVDAVHKIREEGEQRGTSSSHMARSRSPEQSPVGARFQRSEPQRSHSGPRNASQFQQRFGRQERAVEDRVREDMQKFARGSPQARAYGNSGARGRSSHSRSPRQPPYTGNSYNSIDGRNQNIGSYRNDGWDSHRRESAGIQPSHQFDYSTSPKTLEELELEYKKEATELMKNRDREEDEENFKHREAVRDLRENYMNKVAMLRVSHAKQWEEFLQLEAHRHQQHTIQQIPSGFGSYKQQNFTEYDGSAVNPHYAGPNLPLESRNRFSDMENYPTRPHDNFGEFQRRGGDFAKAFNRY* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0737 463 SUPERFAMILY Retrovirus zinc finger-like domains 77 109 IPR036875 GO:0003676|GO:0008270
Ahy16g0737 463 Coils Coil 321 345 - -
Ahy16g0737 463 MobiDBLite consensus disorder prediction 176 315 - -
Ahy16g0737 463 MobiDBLite consensus disorder prediction 227 244 - -
Ahy16g0737 463 MobiDBLite consensus disorder prediction 1 68 - -
Ahy16g0737 463 ProSiteProfiles Zinc finger CCHC-type profile. 90 104 IPR001878 GO:0003676|GO:0008270
Ahy16g0737 463 PANTHER OS01G0252900 PROTEIN 1 463 - -
Ahy16g0737 463 MobiDBLite consensus disorder prediction 184 226 - -
Ahy16g0737 463 MobiDBLite consensus disorder prediction 256 293 - -
Ahy16g0737 463 MobiDBLite consensus disorder prediction 33 55 - -
Ahy16g0737 463 MobiDBLite consensus disorder prediction 1 18 - -
Ahy16g0737 463 PANTHER OS01G0252900 PROTEIN 1 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0737 Ahy-Chr16 13400612 13404342 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0737 - - gmx:100806099 771.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0737 16 13400612 13404342 Ahy16g0737 16 13400612 13404342 ECH
Ahy16g0737 16 13400612 13404342 Ahy6g0600 6 7412204 7416021 hybridization