Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0557 ATGAGAACTCTTGCAAAATTTATTTGTCGTTCTCTTTGTATCTTGCCCAGGCACTTCCAATCAACTCCGCCATTCCCACACCCAATATTCCACCCTCGAATTCCATTTTTCCTACGTTTTTACTCAGCCGAAGTGCAACCTCAACTATCTACGGAGCTCTTGGGCATAATGGAACAGAGACTGTCTGCTATTGAGTACAGGTCTGCCACTCTCAACAATCTTCTCAATCAGCCCGAAATACCACCATCAGAATACGCAAGAGCAAATAAGGAGCTTCGGAAGCTGAGCAGTTCGTTACACCTTATTAACGAGTTGAGGGCTAAACAGAAGGAAATTGATGGCTTGAAGTCACTGGTGGCTGAATGTTCCGATGACAAAGACATGCTTAACATGGCGACAGAGGAAATGGGACAGGCCATAGAGGAAGAACGAAGACTGCAACATTTGCTGTTGAAGTCCTTACTTCCTAAGGATGATGCTGATGAAAGGGACTGCATTTTGGAGGTCAGAGCAGGCACTGGTGGGGAGGAGGCTTCTTTGTTTGCAATGGACATTTTCAAAATGTACGAAAAGTATGCTCACAAGAATGGCTGGAAATTTGTAGTAGTAGATATTGCTCAATCAGATTTTAAAGGATACAAGGAAGCTAGTGCAGCAATTGCTGGAGATGGTGCTTTTGGGAAACTAAAATTTGAAAGTGGAATACATAGAGTACAGAGAGTTCCTGTGACAGAAAAATTAGGACGAGTTCATACCAGTGCTGTTTCTGTCGCAATCCTCCCTCAGGCTGACGAGGTTGATGTTCAATTGAAGAATGAAGACTTAAAAATTGATACCTACAGATCTGGTGGTTCGGGTGGTCAGCATGCAAATACAACAAACAGTGCTGTTAGAATAACTCACATTCCGACTGGGATTACAGTTGCTATACAAGATGAGCGCTCTCAACATCAAAACAAGGCCAAAGCACTTAAAGTACTGTGTGCAAAGCTATTTGAAATGGAAAGGGTCCGAGCTCATAGTACACGATCAAAACTTCGGTCAGAACAGATTGGCAGCGGTGATAGATCTGAACGCATCCGGACATACAACTTTCCTCAAGGTCGTGTCACTGATCATAGAGTTGGTATAACTTATCACTCAATAGATGATGTGATGCAAGGTGAGAATCTTGAGGTATTTATTGATGCTCTTTTATTGCAAGAAGAAATGGATGCAATTGCAACTTTTAGTTCTTCTCAGTAA 1245 0.4241 MRTLAKFICRSLCILPRHFQSTPPFPHPIFHPRIPFFLRFYSAEVQPQLSTELLGIMEQRLSAIEYRSATLNNLLNQPEIPPSEYARANKELRKLSSSLHLINELRAKQKEIDGLKSLVAECSDDKDMLNMATEEMGQAIEEERRLQHLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAMDIFKMYEKYAHKNGWKFVVVDIAQSDFKGYKEASAAIAGDGAFGKLKFESGIHRVQRVPVTEKLGRVHTSAVSVAILPQADEVDVQLKNEDLKIDTYRSGGSGGQHANTTNSAVRITHIPTGITVAIQDERSQHQNKAKALKVLCAKLFEMERVRAHSTRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITYHSIDDVMQGENLEVFIDALLLQEEMDAIATFSSSQ* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0557 414 SMART PCRF_a_2 117 232 IPR005139 GO:0006415
Ahy6g0557 414 Pfam RF-1 domain 264 374 IPR000352 GO:0003747|GO:0006415
Ahy6g0557 414 Hamap Peptide chain release factor 1 [prfA]. 57 411 IPR004373 GO:0006415|GO:0016149
Ahy6g0557 414 Gene3D - 51 159 - -
Ahy6g0557 414 Gene3D - 161 412 - -
Ahy6g0557 414 Gene3D - 264 354 - -
Ahy6g0557 414 SUPERFAMILY Release factor 68 402 IPR045853 -
Ahy6g0557 414 TIGRFAM prfA: peptide chain release factor 1 59 411 IPR004373 GO:0006415|GO:0016149
Ahy6g0557 414 PANTHER LD18447P 40 412 - -
Ahy6g0557 414 Pfam PCRF domain 67 257 IPR005139 GO:0006415
Ahy6g0557 414 PANTHER LD18447P 40 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0557 Ahy-Chr6 6808414 6811277 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0557 K02835 - gmx:100800412 650.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0781 16 14071884 14074981 Ahy6g0557 6 6808414 6811277 hybridization