Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0781 ATGAGAACTCTTGCAAAATTTATTTGTCGTTCTCTTTGTATCTTGCCCAAGCACTTCCAATTAACTCCGCCATTCTCACACCCAATATTCCACCCTCGAATTCCATCTTTACTACGTTTTTACTCTGCCGAAGTGCAACCTCAACTATCTACGGAGCTCTTGAGCATAATGGAACAGAGACTATCTGCTATTGAGTACAGGTCTGCCACTCTCAACAATCTTCTCAATCAGCCCGAAATACCACCATCAGAATACGCAAGAGCAAATAAGGAGCTTCGTAAACTGAGCAGTTCGTTACACCTTATTAACGAGTTGAGGGCTAAACAGAAGGAAATTGATGGCTTGAAGTCACTGGTGGCTGAATGTTCCGATGACAAAGACATGCTTAACATGGCGACAGAGGAAATGGGACAAGCCATAGAGGAAGAACGAAGACTGCAACATTTGCTGTTGAAGTCCTTACTTCCTAAGGATGATGCTGATGAAAGGGACTGCATTTTGGAGGTCAGAGCAGGCACTGGTGGGGAGGAGGCTTCTTTGTTTGCAATGGACATTTTCAAAATGTACGAAAAGTATGCTCACAAGAATGGCTGGAAATTTGTAGTAGTAGATATTGCTCAATCAGATTTTAAAGGATACAAGGAAGCTAGTGCAGCAATTGCAGGAGATGGTGCTTTTGGGAAACTAAAATTTGAAAGTGGAATACATAGAGTACAGAGAGTTCCGGTGACAGAAAAATTAGGTCGAGTTCATACCAGTGCTGTTTCTGTCGCAATCCTCCCCCAGGCTGACGAGGTTGATGTTCAATTGAAGAATGAAGACTTAAAAATTGATACCTACAGATCTGGTGGTTCGGGTGGTCAGCATGCAAATACAACAAACAGTGCTGTTAGAATAACTCACATTCCGACTGGGATTACAGTTGCTATACAAGATGAGCGTTCTCAACATCAAAACAAGGCCAAAGCACTTAAAGTACTGTGTGCAAAGCTATTTGAAATGGAAAGGGTCCGAGCTCATAGTACACGATCAAAACTTCGGTCAGAACAGATTGGCAGCGGTGATAGATCTGAACGCATCCGGACATACAACTTTCCTCAAGGTCGTGTCACCGATCATAGAGTTGGTATAACTTATCACTCAATAGATGATGTGATGCAAGGTGAGAATCTTGAGGTATTTATTGATGCTCTTTTATTGCAAGAAGAAATGGATGCAATTGCAACTTTTAGTTCTTCTCAGTAA 1245 0.4193 MRTLAKFICRSLCILPKHFQLTPPFSHPIFHPRIPSLLRFYSAEVQPQLSTELLSIMEQRLSAIEYRSATLNNLLNQPEIPPSEYARANKELRKLSSSLHLINELRAKQKEIDGLKSLVAECSDDKDMLNMATEEMGQAIEEERRLQHLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAMDIFKMYEKYAHKNGWKFVVVDIAQSDFKGYKEASAAIAGDGAFGKLKFESGIHRVQRVPVTEKLGRVHTSAVSVAILPQADEVDVQLKNEDLKIDTYRSGGSGGQHANTTNSAVRITHIPTGITVAIQDERSQHQNKAKALKVLCAKLFEMERVRAHSTRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITYHSIDDVMQGENLEVFIDALLLQEEMDAIATFSSSQ* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0781 414 SMART PCRF_a_2 117 232 IPR005139 GO:0006415
Ahy16g0781 414 Hamap Peptide chain release factor 1 [prfA]. 57 411 IPR004373 GO:0006415|GO:0016149
Ahy16g0781 414 Gene3D - 50 159 - -
Ahy16g0781 414 Pfam PCRF domain 67 257 IPR005139 GO:0006415
Ahy16g0781 414 SUPERFAMILY Release factor 68 402 IPR045853 -
Ahy16g0781 414 Pfam RF-1 domain 264 374 IPR000352 GO:0003747|GO:0006415
Ahy16g0781 414 Gene3D - 264 354 - -
Ahy16g0781 414 PANTHER LD18447P 40 412 - -
Ahy16g0781 414 TIGRFAM prfA: peptide chain release factor 1 58 411 IPR004373 GO:0006415|GO:0016149
Ahy16g0781 414 Gene3D - 161 412 - -
Ahy16g0781 414 PANTHER LD18447P 40 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0781 Ahy-Chr16 14071884 14074981 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0781 K02835 - gmx:100800412 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0781 16 14071884 14074981 Ahy6g0557 6 6808414 6811277 hybridization