Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0078 ATGTCCAACAATTGCAAGGTGAAGGGGATTCTAAGAGGGATTAGATTCATTTCTCAGATATTTGAAAGTGATAAAGAACAAGAAATTGAGATTGGTCATCCCACAGATGTGAAGCATGTGGCCCACATCGGGTGGCAGGGTCCTTCGGCTGAAAATAATCCTAGCTGGATGAACGAGTTTAAATCTGTTCATGGACTTTCAGCATCAGCACCTCTAAGTCTTCATGGAGACATTCATAGCCAAGGAGATGAATATTCCGACGGTAGTATTAGAGATATAACCATTAGTGTTATTCTTTTCCATCAGCGTAAGCCTTTGGAATGA 324 0.4105 MSNNCKVKGILRGIRFISQIFESDKEQEIEIGHPTDVKHVAHIGWQGPSAENNPSWMNEFKSVHGLSASAPLSLHGDIHSQGDEYSDGSIRDITISVILFHQRKPLE* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0078 107 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC5-LIKE 5 67 - -
Ahy6g0078 107 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC8 5 67 IPR044510 -
Ahy6g0078 107 CDD CRIB 29 67 - -
Ahy6g0078 107 Pfam P21-Rho-binding domain 30 62 IPR000095 -
Ahy6g0078 107 Gene3D CRIB domain 24 70 IPR036936 -
Ahy6g0078 107 ProSiteProfiles CRIB domain profile. 31 44 IPR000095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0078 Ahy-Chr6 1119585 1121509 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0078 - - ahf:112698008 223.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1382 16 27631119 27633742 Ahy6g0078 6 1119585 1121509 hybridization
Ahy6g0078 6 1119585 1121509 Ahy2g0884 2 17660994 17663834 PCT
Ahy2g0884 2 17660994 17663834 Ahy6g0078 6 1119585 1121509 PCT