Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1382 ATGTCCAACAATTGCAAGGTGAAGGGCATTCTAAGAGGGATTAGATTCATTTCTCAGATATTTGAAAGTGATAAAGAACAAGAAATTGAGATTGGTCATCCCACAGATGTGAAGCATGTGGCCCACATCGGGTGGCAGGGTCCTTCGGCTGAAAATAATCCTAGCTGGATGAACGAGTTTAAATCTGTTCATGGACTTTCAGCATCAGCACCTCTAAGTCTTCATGGAGACATTCATAGCCAAGGAGATGACAATTCATCCCAATGCCTCTCCGACGATTCAATAAAAAGAGGTTCAAGGAGGCAATCAATGGGAAACATGAGAGAATCTCATGCAAAGGAAAAATCAGACAGGCCAAAGAATCCCAAAACTAGGTCATCCAAATCAAAGGAATCATCATCATGCAATAATAATGAATCCACCAATTCCAAATGCTCCTCAGAGCAACCATCAAATGACATGGACTCTATCCAACAACAAATCCAAGGTTGTAGTAGTGACTTAAATTTGCAGCCACCTAGGAACAACCTATTACCAGATGTTCCTAAACTTAAAAGGACTAGCTCCACTAAAGTTAAAGATGCTTCTTCCAACGCTGGTTCTACCTCAACCAAGTCAAGATCATCAAGAGCACAAAGAATTTTGAACAAAGAAATCTCTTCTAGATCAGGCCACAAAGCTAGAAAGAAACATAGACATTTTGAAGAAGATCAATCAGAGTCAGAACAAGACCAAGACCAAGATGGACATCAAACTCAAAGGGGATCTGACAAAATCCTCTGGACAAATTAG 792 0.4028 MSNNCKVKGILRGIRFISQIFESDKEQEIEIGHPTDVKHVAHIGWQGPSAENNPSWMNEFKSVHGLSASAPLSLHGDIHSQGDDNSSQCLSDDSIKRGSRRQSMGNMRESHAKEKSDRPKNPKTRSSKSKESSSCNNNESTNSKCSSEQPSNDMDSIQQQIQGCSSDLNLQPPRNNLLPDVPKLKRTSSTKVKDASSNAGSTSTKSRSSRAQRILNKEISSRSGHKARKKHRHFEEDQSESEQDQDQDGHQTQRGSDKILWTN* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1382 263 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC8 6 213 IPR044510 -
Ahy16g1382 263 MobiDBLite consensus disorder prediction 94 127 - -
Ahy16g1382 263 MobiDBLite consensus disorder prediction 230 253 - -
Ahy16g1382 263 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC11 6 213 - -
Ahy16g1382 263 MobiDBLite consensus disorder prediction 191 218 - -
Ahy16g1382 263 MobiDBLite consensus disorder prediction 79 93 - -
Ahy16g1382 263 ProSiteProfiles CRIB domain profile. 31 44 IPR000095 -
Ahy16g1382 263 MobiDBLite consensus disorder prediction 74 263 - -
Ahy16g1382 263 CDD CRIB 29 67 - -
Ahy16g1382 263 Gene3D CRIB domain 24 70 IPR036936 -
Ahy16g1382 263 MobiDBLite consensus disorder prediction 128 173 - -
Ahy16g1382 263 Pfam P21-Rho-binding domain 30 62 IPR000095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1382 Ahy-Chr16 27631119 27633742 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1382 - - aip:110263241 497.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1382 16 27631119 27633742 Ahy6g0078 6 1119585 1121509 hybridization
Ahy16g1382 16 27631119 27633742 Ahy2g0884 2 17660994 17663834 PCT
Ahy2g0884 2 17660994 17663834 Ahy16g1382 16 27631119 27633742 PCT