Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0060 ATGCTTCTCAGAAGCTCTTCAACCCCAATTCTTGGTTCCCTCCACTCATCCTTCACAGACAGTCCTAATAACAATAGCATTCACTCTGAATCCTGCCATGCATTCAAGCATCATCTTCCACCATGTGTCCCTCAACATCATCACCAAAAAATCTCTTTCCATCAATCTCCCTTTATGCAGTTCTCATGCACTTCCTCTCCAATCTCACCCTCAATCTCTGAAGGCCAATGCAAAGGCTTCAGAAGAGTTCAGTCTGAAGGAAACTTGGAGGATTTAGCTATTGCTACTTGCAACAACAACAATGAAGACATAGTAGGAGATATTCCTTTCAAGAGATTTTCAGCAAGACCAAAGTGTATGGTACTTGAGACTATTCCCTCTTTCTCTGTTACCAAGCACAAAGGCTTGTGCGAAGAAGATGCAGACGATGAAGAGACCGACAGTGACAGTGACATTGAATATGAGAAAGGAAGTGGAAGCTTAATGAATCTTCAAAAGGGTATGGTACTGTCTGAAGAAGTGAGAGATGGAAGCTGCAGGGTAGGTTTTGCTGAGAGGGAAGAAGAGTTTGGTGGTAAACAAATGTATCTTGCAAGAGGGCTTGGAGTTGATGTCTGCGTGGATGGCATAGGTGGCTGCAGGGGCGGTAGAGGTGGTGGCAGTGGTGGTGGTGGTGGTGATTATAACTCCATGAGCTCTGGAGGAAATGATGGAGATAGATTTGAGGTGGAAGAATATTACAAGAAGATGCTGGAAGAAAATCCTGGGAACGCTTTGTTTCTGAGAAATTATGCTCAGTATTTGTATCAGTGCAAAGAAGACCGTGAAGGAGCCGAGGAGTATTATTCGCGTGCCATCCTAGCAGATCCAAAAGACGGCGATGTTCTATCACAGTATGGGAAGCTAGTTTGGGAGCTACACAAGGATGAAGAACGAGCGTCAGCCTATTTTGAAAGAGCGGTACAAGCCTCTCCTGAAGACAGCCATGTACATGCAGCATATGCAAGTTTCCTTTGGGACACAGAGGAGGGTGAGGATGATTGCAATGATTCAGAGTGTTTGCCACCACAATTTCATCAAGGAGCTATGGCTACTGCTAGTGCCTAA 1107 0.449 MLLRSSSTPILGSLHSSFTDSPNNNSIHSESCHAFKHHLPPCVPQHHHQKISFHQSPFMQFSCTSSPISPSISEGQCKGFRRVQSEGNLEDLAIATCNNNNEDIVGDIPFKRFSARPKCMVLETIPSFSVTKHKGLCEEDADDEETDSDSDIEYEKGSGSLMNLQKGMVLSEEVRDGSCRVGFAEREEEFGGKQMYLARGLGVDVCVDGIGGCRGGRGGGSGGGGGDYNSMSSGGNDGDRFEVEEYYKKMLEENPGNALFLRNYAQYLYQCKEDREGAEEYYSRAILADPKDGDVLSQYGKLVWELHKDEERASAYFERAVQASPEDSHVHAAYASFLWDTEEGEDDCNDSECLPPQFHQGAMATASA* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0060 368 Gene3D Tetratricopeptide repeat domain 228 346 IPR011990 GO:0005515
Ahy6g0060 368 SMART hat_new_1 238 270 IPR003107 GO:0006396
Ahy6g0060 368 SMART hat_new_1 273 305 IPR003107 GO:0006396
Ahy6g0060 368 SMART hat_new_1 308 340 IPR003107 GO:0006396
Ahy6g0060 368 PANTHER OSJNBA0004N05.2 PROTEIN 1 353 - -
Ahy6g0060 368 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 353 - -
Ahy6g0060 368 SUPERFAMILY TPR-like 241 343 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0060 Ahy-Chr6 864879 867503 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0060 - - gmx:100788436 404.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1408 16 28519717 28522202 Ahy6g0060 6 864879 867503 hybridization