Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1408 ATGCTTCTCAGAAGCTCTTCAACCCCAATTCTTGGTTCCCTCCACTCATCCTTCACAGACAGTCCTAATAACAATAGCATTCACTCTGAGTCCTGCCATGCATTCAAGCATCATCTTCCACCATGTGTCCCTCAACATCATCACCAAAAAATCTCTTTCCATCAATCTCCCTTTATGCAGTTCTCGTGCACTTCCTCTCCAATCTCACCCTCAATCTCTGAAGGCCAATGCAAAGGCTTCAGAAGAGTTCAGTCTGAAGGGAACTTGGAGGATTTAGCTATTGCTACTTGCAACAACAACAATGAAGACATAGTAGGAGATATTCCTTTCAAGAGATTTTCAGCAAGACCAAAGTGTATGGTACTCGAGACTATTCCCTCTTTCTCTGTTACCAAGCACAAAGGCTTGTGCGAAGAAGATGCAGACGATGAAGAAACCGACAGTGACAGTGACATTGAATATGAGAAAGAAAGTGGAAGCTTAATGAATCTTCAAAAGGGTATGGTACTGTCTGAAGAAGTGAGAGATGGAAGCTGCAGGGTAGGTTTTGCTGAGAGGGAAGAAAAGTTTGGTGGTAAACAAATGTATCTTGCAAGAGGGCTTGGAGTTGATGTCTGCGTGGATGGCATAGGTGGCTGCAGGGGTGGTAGAGGTGGTGGCAGTGGTGGTGGTGGTGGTGATTATAACTCCATGAGCTCTGGAGGAAATGATGGAGATAGATCTGAGGTGGAAGAATATTACAAGAAGATGCTGGAAGAAAATCCTGGGAACCCTTTGTTTCTGAGAAATTATGCTCAGTATTTGTATCAGTGCAAAGAAGACCATGAAGGAGCCGAGGAGTATTATTCGCGTGCCATCCTAGCAGATCCAGAAGACGGCGATGTTCTATCACAGTATGGGAAGCTAGTTTGGGAGCTACACAAGGACGAAGAACGAGCGTCAGCCTATTTTGAAAGAGCGGTACAAGCCTCTCCTGAAGACAGCCATGTACATGCAGCGTATGCAAGTTTCCTTTGGGACACAGAGGAGGGTGAGGATGATTGCAATGATTCAGAGTGTTTGCCACCACAATTTCATCAAGGAGCTATGGCTACTGCTGGTGCCTAA 1107 0.4526 MLLRSSSTPILGSLHSSFTDSPNNNSIHSESCHAFKHHLPPCVPQHHHQKISFHQSPFMQFSCTSSPISPSISEGQCKGFRRVQSEGNLEDLAIATCNNNNEDIVGDIPFKRFSARPKCMVLETIPSFSVTKHKGLCEEDADDEETDSDSDIEYEKESGSLMNLQKGMVLSEEVRDGSCRVGFAEREEKFGGKQMYLARGLGVDVCVDGIGGCRGGRGGGSGGGGGDYNSMSSGGNDGDRSEVEEYYKKMLEENPGNPLFLRNYAQYLYQCKEDHEGAEEYYSRAILADPEDGDVLSQYGKLVWELHKDEERASAYFERAVQASPEDSHVHAAYASFLWDTEEGEDDCNDSECLPPQFHQGAMATAGA* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1408 368 Gene3D Tetratricopeptide repeat domain 226 346 IPR011990 GO:0005515
Ahy16g1408 368 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 351 - -
Ahy16g1408 368 PANTHER OSJNBA0004N05.2 PROTEIN 1 351 - -
Ahy16g1408 368 MobiDBLite consensus disorder prediction 218 240 - -
Ahy16g1408 368 SMART hat_new_1 238 270 IPR003107 GO:0006396
Ahy16g1408 368 SMART hat_new_1 273 305 IPR003107 GO:0006396
Ahy16g1408 368 SMART hat_new_1 308 340 IPR003107 GO:0006396
Ahy16g1408 368 SUPERFAMILY TPR-like 238 343 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1408 Ahy-Chr16 28519717 28522202 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1408 - - gmx:100788436 410.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1408 16 28519717 28522202 Ahy6g0060 6 864879 867503 hybridization