Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0051 ATGGAGGACGAAGCTGACATATACGACGGCGTTAGGGCTCAGTTTCCTCTCAGCTTCGGCAAGCAATCCAAGTCTCAGACCCCTCTCGAAGCCATCCACAACGCCACGCGTCGATCTAATACCAATCCTCCTCCTCCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCGAAGCCTGCAACCGCAAGCGCTCTTCCTTCTCTCTCTTCTTCTTCTAAGGAATGGCTCAATTCCCTACGCTCCTCTAAAAACCCTACCCCTACTCTTGCTGATCGTGGTGGCGGTTCTGAGATTGGCCCGCCGCCACCTCCGCCTCCGACGGCAGAGGATGATAACGACGATGGCGCCATGGTGGGGCCGCCTCCCCCTCCACCTCCGGGGGTGGGTTCGGGGGCGGATGAGGACGAAGACGACGATATGATTGGGCCGCCCCCGCCGCCGTCTGGTAACAATTTGAGCTCCGACGACGACGATGATTCCAATGGAGATGAGTTGGGGAACCGGTTCCGTATTCCACTTAGCAACGAGATTGTCCTCAAGGGCCACACCAAGGTTGTGTCAGCTCTTGCTGTAGATCACACTGGATCTAGAGTGCTTTCTGGAAGTTATGACTACTCAGTGCGGATGTACGATTTTCAAGGAATGAATGCTCGTTTGCAATCGTTTCGACAACTGGAGCCCGCTGAAGGTCATCAAGTTCGCAACTTAAGCTGGAGTCCAACAGCAGATCGGTTTTTGTGTGTGACTGGATCAGCTCAAGCAAAGATTTATGATCGCGATGGGCTTACTTTGGGAGAGTTTATGAAGGGAGACATGTATATTCGTGATCTAAAGAATACCAAGGGCCACATATCTGGATTGACATGTGGAGAGTGGCATCCAAAAACTAAAGAGACAATCTTAACATCATCAGAGGATGGATCACTGCGAATATGGGATGTAAATGACTTCAAAAGCCAGAAGCAGGTAATTAAACCAAAGCTTGCAAGGCCTGGAAGAGTTCCTGTAACCACATGTGCATGGGACCATGATGGTAAACGCATTGCTGGTGGTATAGGAGATGGTTCTATACAGGTTTGGAGCATTAAGCCTGGGTGGGGGAGTAGGCCAGATATACATATTGAAAAAAGTCATTCAGATGATATTACTGGTCTGAAATTTTCTAGTGATGGGAATATCCTATTGTCAAGAAGCTTTGATGGTTCACTGAAGGTTTGGGATATGCGTAAAACAAAGGAAGCATTGAAGGTATTTGAGGATCTTCCAAATAATTACGGACAAACAAATATTGCATTCAGTCCTGGTGAGAATCTATTTTTTACTGGAACATCTGTTGAAAGAGAGAGCACAGTTGGGGGTTTATTGTGCTTCTTTGATAGAGCAAACCTTGAACTTGTTTCAAGAGTTGGCATATCCCCCTCTTGTAGTGTTGTTCGGTGTTGTTGGCATCCTAAACTGAATCAGATCTTTGCAACGGTTGGTGATAAAAACCAAGGAGGGACTCACATACTATATGATCCCACCATCAGTGAAAGAGGAGCCCTTGTTTGTGTTGCACGTGCACCAAGGAAAAAATCAATCGACGATTTTGAGGCAAAGCCTGTCATTCACAATCCCCATGCGTTACCACTGTTTAGAGATCAGCCAAGCCGTAAGCGTCAACGGGAGAAAGTATTAAAGGATCCATTGAAGTCCCACAAGCCTGAACTTCCCATAACAGGACCTGGCTTTGGTGGACGGGTCGGTGCAAGTCAAGGAAGCTTACTAACCCAGTATCTTATGAAGCAAGGAGGTATGATCAAGGAGACATGGATGGAGGAGGATCCAAGGGAAGCCATCTTGAAATATGCTGACGCAGCAGCAAAAGATCCAAAATTCATTGCTCCAGCATATGCAGATACTCAACCTGAGCCAGTGTTCGCAAAGTCGGATTCTGAGGAAGAAGAAAAATGA 1950 0.4718 MEDEADIYDGVRAQFPLSFGKQSKSQTPLEAIHNATRRSNTNPPPPPSSSSSSSSSKPATASALPSLSSSSKEWLNSLRSSKNPTPTLADRGGGSEIGPPPPPPPTAEDDNDDGAMVGPPPPPPPGVGSGADEDEDDDMIGPPPPPSGNNLSSDDDDDSNGDELGNRFRIPLSNEIVLKGHTKVVSALAVDHTGSRVLSGSYDYSVRMYDFQGMNARLQSFRQLEPAEGHQVRNLSWSPTADRFLCVTGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHISGLTCGEWHPKTKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLARPGRVPVTTCAWDHDGKRIAGGIGDGSIQVWSIKPGWGSRPDIHIEKSHSDDITGLKFSSDGNILLSRSFDGSLKVWDMRKTKEALKVFEDLPNNYGQTNIAFSPGENLFFTGTSVERESTVGGLLCFFDRANLELVSRVGISPSCSVVRCCWHPKLNQIFATVGDKNQGGTHILYDPTISERGALVCVARAPRKKSIDDFEAKPVIHNPHALPLFRDQPSRKRQREKVLKDPLKSHKPELPITGPGFGGRVGASQGSLLTQYLMKQGGMIKETWMEEDPREAILKYADAAAKDPKFIAPAYADTQPEPVFAKSDSEEEEK* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0051 649 Gene3D - 269 506 IPR015943 GO:0005515
Ahy6g0051 649 CDD WD40 177 495 - -
Ahy6g0051 649 SUPERFAMILY WD40 repeat-like 165 495 IPR036322 GO:0005515
Ahy6g0051 649 PRINTS G protein beta WD-40 repeat signature 299 313 IPR020472 -
Ahy6g0051 649 PRINTS G protein beta WD-40 repeat signature 393 407 IPR020472 -
Ahy6g0051 649 PRINTS G protein beta WD-40 repeat signature 347 361 IPR020472 -
Ahy6g0051 649 MobiDBLite consensus disorder prediction 547 566 - -
Ahy6g0051 649 ProSitePatterns Trp-Asp (WD) repeats signature. 299 313 IPR019775 -
Ahy6g0051 649 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 374 408 - -
Ahy6g0051 649 Gene3D - 171 268 IPR015943 GO:0005515
Ahy6g0051 649 ProSiteProfiles Trp-Asp (WD) repeats profile. 279 321 IPR001680 GO:0005515
Ahy6g0051 649 MobiDBLite consensus disorder prediction 628 649 - -
Ahy6g0051 649 MobiDBLite consensus disorder prediction 1 166 - -
Ahy6g0051 649 ProSiteProfiles Trp-Asp (WD) repeats profile. 335 362 IPR001680 GO:0005515
Ahy6g0051 649 SMART WD40_4 316 360 IPR001680 GO:0005515
Ahy6g0051 649 SMART WD40_4 269 312 IPR001680 GO:0005515
Ahy6g0051 649 SMART WD40_4 217 257 IPR001680 GO:0005515
Ahy6g0051 649 SMART WD40_4 367 406 IPR001680 GO:0005515
Ahy6g0051 649 SMART WD40_4 171 210 IPR001680 GO:0005515
Ahy6g0051 649 MobiDBLite consensus disorder prediction 52 88 - -
Ahy6g0051 649 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 178 212 - -
Ahy6g0051 649 PANTHER GASTRULATION DEFECTIVE PROTEIN 1-RELATED 3 649 - -
Ahy6g0051 649 MobiDBLite consensus disorder prediction 18 39 - -
Ahy6g0051 649 MobiDBLite consensus disorder prediction 547 577 - -
Ahy6g0051 649 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 279 314 - -
Ahy6g0051 649 ProSiteProfiles Trp-Asp (WD) repeats profile. 178 219 IPR001680 GO:0005515
Ahy6g0051 649 Pfam WD domain, G-beta repeat 374 406 IPR001680 GO:0005515
Ahy6g0051 649 Pfam WD domain, G-beta repeat 334 360 IPR001680 GO:0005515
Ahy6g0051 649 Pfam WD domain, G-beta repeat 176 210 IPR001680 GO:0005515
Ahy6g0051 649 Pfam WD domain, G-beta repeat 277 312 IPR001680 GO:0005515
Ahy6g0051 649 ProSiteProfiles Trp-Asp (WD) repeats profile. 374 415 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0051 Ahy-Chr6 756112 760034 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0051 281 479 Miscellaneous Gene Families AT5G08390 24.000 1.95e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0051 K24752 - gmx:100815380 1030.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1420 16 29090581 29094470 Ahy6g0051 6 756112 760034 hybridization