Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1420 ATGGAGGACGAAGCTGACATATACGACGGCGTTAGGGCTCAGTTTCCTCTCAGCTTCGGCAAGCAATCCAAGTCTCAGACCCCTCTCGAAGCCATCCACAACGCCACGCGTCGATCTAATACCAATCCTCCTCCTTCTTCTTCTTCTTCTTCGAAGCTTGCAACCGCAAGCGCTCTTCCTTCTCTCTCTTCTTCTTCTAAGGAATGGCTCAATTCCCTACGCTCCTCTAAAAACCCTACCCCTACACTTGCTGATCGTGGTGGCGGTTCTGAGATTGGCCCGCCGCCACCTCCGCCTCCGACAGCAGAGGATGATAACGACGATGGCGCCATGGTGGGGCCGCCTCCTCCTCCACCTACCGGGGTGGGTTCGGGGGCGGATGAGGACGAAGACGACGATATGATTGGACCGCCCCCGCCGCCGTCTGGTAACAATTTGAACTCCGACGACGACGATGATTCCAATGGAGATGAGTTGGGGAACCGGTTCCGTATTCCACTTAGCAACGAGATTGTCCTCAAGGGCCACACCAAGGTTGTGTCAGCTCTTGCTGTAGATCACACTGGATCTAGAGTGCTTTCTGGAAGTTATGATTACTCAGTGCGGATGTACGATTTTCAAGGAATGAATGCTCGTTTGCAATCGTTTCGACAACTGGAGCCCGCTGAAGGTCATCAAGTTCGCAACTTAAGCTGGAGTCCAACAGCAGATCGGTTTTTGTGTGTGACTGGATCAGCTCAAGCAAAGATTTATGATCGCGATGGGCTTACTTTGGGAGAGTTTATGAAGGGAGACATGTATATTCGTGATCTAAAGAATACCAAGGGCCACATATCTGGATTGACATGTGGAGAGTGGCATCCAAAAACTAAAGAGACAATCTTAACATCATCAGAGGATGGATCACTGCGAATATGGGATGTAAATGACTTCAAAAGTCAGAAGCAGGTAATTAAACCAAAGCTTGCAAGGCCTGGAAGAGTTCCTGTAACCACATGTGCATGGGACCATGATGGTAAACGCATTGCTGGTGGTATAGGAGATGGTTCTATACAGGTTTGGAGCATTAAGCCTGGGTGGGGGAGTAGGCCAGATATACATATTGAAAAAAGTCATTCAGATGATATTACTGGTCTGAAATTTTCTAGTGATGGGAATATCCTATTGTCAAGAAGCTTTGATGGTTCACTGAAGGTTTGGGATATGCGTAAAACAAAGGAAGCATTGAAGGTATTTGAGGATCTTCCAAATAATTACGGACAAACAAATATTGCATTCAGTCCTGGTGAGAATCTATTTTTTACTGGAACATCTGTTGAAAGAGAGAGCACAGTTGGGGGTTTATTGTGCTTCTTTGATAGAGCAAACCTTGAACTTGTTTCAAGAGTCGGCATATCCCCCTCTTGTAGTGTTGTTCGGTGTTGTTGGCATCCTAAACTGAATCAGATCTTTGCAACGGTTGGTGATAAAAACCAAGGAGGGACTCACATACTATATGATCCCACCATCAGTGAAAGAGGAGCCCTTGTTTGTGTTGCACGTGCACCAAGGAAAAAATCAATCGACGATTTTGAGGCAAAGCCTGTCATTCACAATCCCCATGCCTTACCACTGTTTAGAGATCAGCCAAGCCGTAAGCGTCAACGGGAGAAAGTATTAAAGGATCCATTGAAGTCCCACAAGCCTGAACTTCCCATAACAGGACCTGGCTTTGGTGGACGGGTCGGTGCAAGTCAAGGAAGCTTACTAACCCAGTATCTTATGAAGCAAGGAGGTATGATCAAGGAGACATGGATGGAGGAGGATCCAAGGGAAGCCATCTTGAAATATGCTGACGCAGCAGCAAAGGATCCAAAATTCATTGCTCCAGCATATGCAGATACTCAACCTGAGCCAGTGTTCGCAAAGTCGGATTCCGAGGAAGAAGAAAAATGA 1935 0.4693 MEDEADIYDGVRAQFPLSFGKQSKSQTPLEAIHNATRRSNTNPPPSSSSSSKLATASALPSLSSSSKEWLNSLRSSKNPTPTLADRGGGSEIGPPPPPPPTAEDDNDDGAMVGPPPPPPTGVGSGADEDEDDDMIGPPPPPSGNNLNSDDDDDSNGDELGNRFRIPLSNEIVLKGHTKVVSALAVDHTGSRVLSGSYDYSVRMYDFQGMNARLQSFRQLEPAEGHQVRNLSWSPTADRFLCVTGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHISGLTCGEWHPKTKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLARPGRVPVTTCAWDHDGKRIAGGIGDGSIQVWSIKPGWGSRPDIHIEKSHSDDITGLKFSSDGNILLSRSFDGSLKVWDMRKTKEALKVFEDLPNNYGQTNIAFSPGENLFFTGTSVERESTVGGLLCFFDRANLELVSRVGISPSCSVVRCCWHPKLNQIFATVGDKNQGGTHILYDPTISERGALVCVARAPRKKSIDDFEAKPVIHNPHALPLFRDQPSRKRQREKVLKDPLKSHKPELPITGPGFGGRVGASQGSLLTQYLMKQGGMIKETWMEEDPREAILKYADAAAKDPKFIAPAYADTQPEPVFAKSDSEEEEK* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1420 644 MobiDBLite consensus disorder prediction 623 644 - -
Ahy16g1420 644 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 274 309 - -
Ahy16g1420 644 ProSitePatterns Trp-Asp (WD) repeats signature. 294 308 IPR019775 -
Ahy16g1420 644 Gene3D - 264 500 IPR015943 GO:0005515
Ahy16g1420 644 ProSiteProfiles Trp-Asp (WD) repeats profile. 369 410 IPR001680 GO:0005515
Ahy16g1420 644 SUPERFAMILY WD40 repeat-like 160 490 IPR036322 GO:0005515
Ahy16g1420 644 Gene3D - 166 263 IPR015943 GO:0005515
Ahy16g1420 644 PANTHER GASTRULATION DEFECTIVE PROTEIN 1-RELATED 3 644 - -
Ahy16g1420 644 MobiDBLite consensus disorder prediction 1 161 - -
Ahy16g1420 644 MobiDBLite consensus disorder prediction 542 561 - -
Ahy16g1420 644 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 173 207 - -
Ahy16g1420 644 ProSiteProfiles Trp-Asp (WD) repeats profile. 274 316 IPR001680 GO:0005515
Ahy16g1420 644 ProSiteProfiles Trp-Asp (WD) repeats profile. 330 357 IPR001680 GO:0005515
Ahy16g1420 644 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 369 403 - -
Ahy16g1420 644 MobiDBLite consensus disorder prediction 18 83 - -
Ahy16g1420 644 ProSiteProfiles Trp-Asp (WD) repeats profile. 173 214 IPR001680 GO:0005515
Ahy16g1420 644 CDD WD40 172 490 - -
Ahy16g1420 644 MobiDBLite consensus disorder prediction 542 572 - -
Ahy16g1420 644 Pfam WD domain, G-beta repeat 272 307 IPR001680 GO:0005515
Ahy16g1420 644 Pfam WD domain, G-beta repeat 171 205 IPR001680 GO:0005515
Ahy16g1420 644 Pfam WD domain, G-beta repeat 329 355 IPR001680 GO:0005515
Ahy16g1420 644 Pfam WD domain, G-beta repeat 369 401 IPR001680 GO:0005515
Ahy16g1420 644 PRINTS G protein beta WD-40 repeat signature 342 356 IPR020472 -
Ahy16g1420 644 PRINTS G protein beta WD-40 repeat signature 388 402 IPR020472 -
Ahy16g1420 644 PRINTS G protein beta WD-40 repeat signature 294 308 IPR020472 -
Ahy16g1420 644 SMART WD40_4 264 307 IPR001680 GO:0005515
Ahy16g1420 644 SMART WD40_4 166 205 IPR001680 GO:0005515
Ahy16g1420 644 SMART WD40_4 311 355 IPR001680 GO:0005515
Ahy16g1420 644 SMART WD40_4 362 401 IPR001680 GO:0005515
Ahy16g1420 644 SMART WD40_4 212 252 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1420 Ahy-Chr16 29090581 29094470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1420 276 474 Miscellaneous Gene Families AT5G08390 24.000 2.33e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1420 K24752 - gmx:100815380 1031.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1420 16 29090581 29094470 Ahy6g0051 6 756112 760034 hybridization